SMTL ID : 3ai5.1

Crystal structure of yeast enhanced green fluorescent protein-ubiquitin fusion protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 2 residues within 4Å: Chain A: E.143, Y.144 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.144 EDO.2: 7 residues within 4Å: Chain A: V.14, E.37, G.38, D.39, K.44, L.45, T.46 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.37, A:T.46 Water bridges: A:K.44, A:K.44 EDO.3: 6 residues within 4Å: Chain A: E.96, R.97, T.98, Y.183, Q.184 Ligands: EDO.5 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.97 Water bridges: A:Q.185 EDO.4: 5 residues within 4Å: Chain A: R.110, A.111, E.112, R.123, E.125 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.110, A:R.110, A:E.125 EDO.5: 6 residues within 4Å: Chain A: E.96, R.97, T.98, K.108, T.109 Ligands: EDO.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.109

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Suzuki, N. et al., Crystallization of small proteins assisted by green fluorescent protein. Acta Crystallogr.,Sect.D (2010)

Release Date

2010-09-29

Peptides

yeast enhanced green fluorescent protein,Ubiquitin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

yeast enhanced green fluorescent protein,Ubiquitin