SMTL ID : 3aj5.2 (2 other biounits)

HA1 (HA33) subcomponent of botulinum type C progenitor toxin complexed with N-acetylgalactosamine, bound at site II

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x NGA: 2-acetamido-2-deoxy-beta-D-galactopyranose(Non-covalent)

NGA.1: 10 residues within 4Å: Chain A: D.256, V.257, Y.258, N.259, I.269, D.271, H.274, N.276, N.278, Q.279 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.256, A:N.259, A:H.274, A:N.278 Water bridges: A:N.259, A:S.260

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nakamura, T. et al., Molecular diversity of the two sugar-binding sites of the beta-trefoil lectin HA33/C (HA1) from Clostridium botulinum type C neurotoxin. Arch.Biochem.Biophys. (2011)

Release Date

2011-06-01

Peptides

Main hemagglutinin component: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Main hemagglutinin component

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