- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.30 Å
- Oligo State
- homo-12-mer
- Ligands
- 12 x FE2: FE (II) ION(Non-covalent)
- 6 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 4 residues within 4Å:- Chain A: R.70, T.74
- Chain C: R.70, T.74
3 PLIP interactions:2 interactions with chain C, 1 interactions with chain A- Hydrogen bonds: C:T.74
- Salt bridges: C:R.70, A:R.70
SO4.6: 4 residues within 4Å:- Chain B: R.70, T.74
- Chain D: R.70, T.74
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain D- Hydrogen bonds: B:T.74, D:T.74
- Salt bridges: B:R.70, D:R.70
SO4.9: 5 residues within 4Å:- Chain E: R.70, T.71, T.74
- Chain G: R.70, T.74
5 PLIP interactions:4 interactions with chain E, 1 interactions with chain G- Hydrogen bonds: E:T.74, E:T.74
- Water bridges: E:T.71
- Salt bridges: E:R.70, G:R.70
SO4.11: 4 residues within 4Å:- Chain F: R.70, T.74
- Chain H: R.70, T.74
4 PLIP interactions:2 interactions with chain F, 2 interactions with chain H- Hydrogen bonds: F:T.74, H:T.74
- Salt bridges: F:R.70, H:R.70
SO4.19: 4 residues within 4Å:- Chain J: R.70, T.74
- Chain L: R.70, T.74
4 PLIP interactions:2 interactions with chain L, 2 interactions with chain J- Hydrogen bonds: L:T.74
- Salt bridges: L:R.70, J:R.70
- Water bridges: J:T.74
SO4.21: 4 residues within 4Å:- Chain I: R.70, T.74
- Chain K: R.70, T.74
4 PLIP interactions:2 interactions with chain I, 2 interactions with chain K- Hydrogen bonds: I:T.74, K:T.74
- Salt bridges: I:R.70, K:R.70
- 4 x MG: MAGNESIUM ION(Non-covalent)
MG.7: 3 residues within 4Å:- Chain D: D.146
- Chain F: D.146
- Chain K: D.146
No protein-ligand interaction detected (PLIP)MG.13: 3 residues within 4Å:- Chain B: D.146
- Chain G: D.146
- Chain L: D.146
No protein-ligand interaction detected (PLIP)MG.15: 3 residues within 4Å:- Chain C: D.146
- Chain H: D.146
- Chain J: D.146
No protein-ligand interaction detected (PLIP)MG.17: 3 residues within 4Å:- Chain A: D.146
- Chain E: D.146
- Chain I: D.146
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Miyamoto, T. et al., Structures of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis. Acta Crystallogr.,Sect.F (2011)
- Release Date
- 2011-01-12
- Peptides
- DNA protection during starvation protein: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
L
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.30 Å
- Oligo State
- homo-12-mer
- Ligands
- 12 x FE2: FE (II) ION(Non-covalent)
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 4 x MG: MAGNESIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Miyamoto, T. et al., Structures of the SEp22 dodecamer, a Dps-like protein from Salmonella enterica subsp. enterica serovar Enteritidis. Acta Crystallogr.,Sect.F (2011)
- Release Date
- 2011-01-12
- Peptides
- DNA protection during starvation protein: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
L