SMTL ID : 3akf.1

Crystal structure of exo-1,5-alpha-L-arabinofuranosidase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: R.336, T.349, N.350 Ligand excluded by PLIP

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: E.80, H.261 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.80, A:E.80

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 8 residues within 4Å: Chain A: D.21, W.77, D.136, E.197, T.217, Y.221, H.261, R.295 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.221, A:H.261, A:R.295, A:R.295 GOL.4: 5 residues within 4Å: Chain A: H.337, W.338, D.339, F.340, D.353 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.339, A:D.339, A:F.340, A:D.353 Water bridges: A:N.350

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fujimoto, Z. et al., Crystal Structure of an Exo-1,5-{alpha}-L-arabinofuranosidase from Streptomyces avermitilis Provides Insights into the Mechanism of Substrate Discrimination between Exo- and Endo-type Enzymes in Glycoside Hydrolase Family 43. J.Biol.Chem. (2010)

Release Date

2010-08-25

Peptides

Putative secreted alpha L-arabinofuranosidase II: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative secreted alpha L-arabinofuranosidase II

Related Entries With Identical Sequence