SMTL ID : 3ang.1 (1 other biounit)

Crystal structure of Thermus thermophilus FadR in complex with E. coli-derived dodecyl-CoA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-dimer

Ligands

2 x DCC: DODECYL-COA(Non-covalent)

DCC.1: 20 residues within 4Å: Chain A: R.168, Y.172, R.176 Chain B: L.64, L.93, M.107, L.111, L.112, A.119, R.120, F.123, L.126, S.150, E.152, R.153, R.156, A.159, D.160, Y.162, F.163 13 PLIP interactions: 10 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:L.64, B:L.93, B:A.119, B:L.126, B:Y.162, B:F.163, A:Y.172 Hydrogen bonds: B:L.111, B:S.150, B:S.150, A:R.168 Salt bridges: B:R.156, A:R.176 DCC.2: 17 residues within 4Å: Chain A: L.64, L.111, L.112, A.119, R.120, F.123, L.126, R.156, D.160, Y.162, F.163 Chain B: L.164, R.168, Y.172, T.173, G.175, R.176 18 PLIP interactions: 12 interactions with chain A, 6 interactions with chain B Hydrophobic interactions: A:L.64, A:L.111, A:F.123, A:L.126, A:Y.162, A:F.163, A:F.163 Hydrogen bonds: A:L.111, A:R.156, B:R.168, B:T.173, B:T.173, B:R.176 Water bridges: A:R.156 Salt bridges: A:R.120, A:R.156, B:R.176, B:R.176

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Agari, Y. et al., TetR-family transcriptional repressor Thermus thermophilus FadR controls fatty acid degradation. Microbiology (2011)

Release Date

2011-03-09

Peptides

Transcriptional repressor, TetR family: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Transcriptional repressor, TetR family

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