SMTL ID : 3aqa.4 (4 other biounits)

Crystal structure of the human BRD2 BD1 bromodomain in complex with a BRD2-interactive compound, BIC1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

1 x BYH: 1-[2-(1H-benzimidazol-2-ylsulfanyl)ethyl]-3-methyl-1,3-dihydro-2H-benzimidazole-2-thione(Non-covalent)

BYH.1: 8 residues within 4Å: Chain A: W.31, P.32, V.37, L.42, C.86, N.90, I.96, M.99 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:W.31, A:W.31, A:P.32, A:V.37 Hydrogen bonds: A:P.32

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.2: 2 residues within 4Å: Chain A: W.31, R.34 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ito, T. et al., Real-Time Imaging of Histone H4K12-Specific Acetylation Determines the Modes of Action of Histone Deacetylase and Bromodomain Inhibitors. Chem.Biol. (2011)

Release Date

2011-05-18

Peptides

Bromodomain-containing protein 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Bromodomain-containing protein 2

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