SMTL ID : 3ayq.1

Crystal structure of inhibitor bound lysozyme from Meretrix lusoria

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.77 Å

Oligo State

monomer

Ligands

1 x 4NN- NAG- NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-[(5S,6R)-5-hydroxy-6-(hydroxymethyl)-2-oxo-5,6-dihydro-2H-pyran-3-yl]acetamide

4NN-NAG-NAG-NAG.1: 18 residues within 4Å: Chain A: E.18, D.29, S.34, Q.39, I.40, K.41, A.43, Y.44, I.46, D.47, Y.72, Y.76, H.93, N.94, G.95, G.96, P.97, K.102 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.18, A:D.29, A:S.34, A:N.94, A:D.47 Water bridges: A:K.27 Salt bridges: A:K.27, A:K.41 Hydrophobic interactions: A:A.43, A:I.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yoneda, K. et al., Crystal structure of inhibitor bound lysozyme from Meretrix lusoria. To be Published

Release Date

2012-05-23

Peptides

Lysozyme: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lysozyme

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