SMTL ID : 3b0q.1

Human PPAR gamma ligand binding domain in complex with MCC555

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

1 x MC5: (5S)-5-({6-[(2-fluorobenzyl)oxy]naphthalen-2-yl}methyl)-1,3-thiazolidine-2,4-dione(Non-covalent)

MC5.1: 17 residues within 4Å: Chain A: I.79, F.80, C.83, R.86, S.87, H.121, I.124, Y.125, L.128, V.137, I.139, L.151, M.162, H.247, L.251, L.267, Y.271 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.79, A:R.86, A:I.124, A:L.128, A:L.128, A:I.139 Hydrogen bonds: A:S.87, A:Y.271

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tomioka, D. et al., Crystal structure of human PPAR gamma in complex with MCC555. To be Published

Release Date

2011-08-10

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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