SMTL ID : 3b0r.1

Human PPAR gamma ligand binding dmain complexed with GW9662 in a covalent bonded form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-dimer

Ligands

2 x GW9: 2-chloro-5-nitro-N-phenylbenzamide(Covalent)

GW9.1: 13 residues within 4Å: Chain A: F.80, C.83, Q.84, R.86, S.87, I.124, Y.125, L.128, F.161, H.247, L.251, L.267, Y.271 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.80, A:Q.84, A:R.86, A:I.124, A:L.128, A:F.161, A:F.161, A:F.161 Hydrogen bonds: A:C.83 GW9.2: 12 residues within 4Å: Chain B: F.80, C.83, Q.84, R.86, S.87, H.121, I.124, Y.125, L.128, F.161, H.247, L.251 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:F.80, B:R.86, B:I.124, B:L.128, B:F.161 Hydrogen bonds: B:C.83, B:Y.125, B:H.247

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shimizu, T., Human PPAR gamma ligand binding dmain complexed with GW9662 in a covalent bonded form. To be published

Release Date

2011-08-10

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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