- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.78 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x 0JO: 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid(Non-covalent)
- 6 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)
EPE.2: 9 residues within 4Å:- Chain A: Y.64, E.272
- Chain B: Y.22, W.37, I.38, V.99, Y.123
- Ligands: 0JO.7, EPE.9
3 PLIP interactions:3 interactions with chain A- Water bridges: A:E.272
- Salt bridges: A:E.272, A:E.272
EPE.3: 3 residues within 4Å:- Chain A: D.340, F.343, R.356
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:D.340, A:R.356
- Salt bridges: A:D.340, A:D.340
EPE.4: 4 residues within 4Å:- Chain A: P.124, P.125, D.359
- Ligands: EPE.8
5 PLIP interactions:5 interactions with chain A- Water bridges: A:R.128, A:N.355, A:N.355
- Salt bridges: A:D.359, A:D.359
EPE.8: 9 residues within 4Å:- Chain A: Y.22, W.37, I.38, V.99, Y.123
- Chain B: Y.64, E.272
- Ligands: 0JO.1, EPE.4
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain A- Salt bridges: B:E.272, B:E.272
- Water bridges: A:Y.123
EPE.9: 4 residues within 4Å:- Chain B: P.124, P.125, D.359
- Ligands: EPE.2
7 PLIP interactions:7 interactions with chain B- Water bridges: B:R.128, B:R.128, B:N.355, B:N.355, B:Y.360
- Salt bridges: B:D.359, B:D.359
EPE.10: 3 residues within 4Å:- Chain B: D.88, K.89, E.90
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:E.90
- Water bridges: B:K.89, B:K.89
- Salt bridges: B:D.88
- 2 x NA: SODIUM ION(Non-functional Binders)
- 1 x ACT: ACETATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kezuka, Y. et al., Structural insights into catalysis by beta C-S lyase from Streptococcus anginosus. Proteins (2012)
- Release Date
- 2012-06-27
- Peptides
- BetaC-S lyase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.78 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x 0JO: 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid(Non-covalent)
- 6 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 1 x ACT: ACETATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kezuka, Y. et al., Structural insights into catalysis by beta C-S lyase from Streptococcus anginosus. Proteins (2012)
- Release Date
- 2012-06-27
- Peptides
- BetaC-S lyase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D