SMTL ID : 3b2k.1

Iodide derivative of human LFABP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.73 Å

Oligo State

monomer

Ligands

2 x PLM: PALMITIC ACID(Non-covalent)

PLM.1: 15 residues within 4Å: Chain A: S.42, I.44, F.53, F.66, E.75, T.76, F.98, S.103, T.105, I.112, N.114, M.116, R.125 Ligands: PLM.2, IOD.3 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.44, A:F.53, A:F.53, A:F.66, A:F.98, A:T.105, A:I.112 Hydrogen bonds: A:S.42 Water bridges: A:S.42, A:N.114, A:R.125 Salt bridges: A:R.125 PLM.2: 14 residues within 4Å: Chain A: F.18, M.22, L.31, K.34, G.35, I.38, I.55, A.57, S.59, M.77, N.114, M.116, R.125 Ligands: PLM.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.18, A:F.18, A:K.34, A:I.38, A:A.57 Salt bridges: A:R.125

5 x IOD: IODIDE ION(Non-functional Binders)

IOD.3: 3 residues within 4Å: Chain A: T.76, M.77 Ligands: PLM.1 Ligand excluded by PLIP IOD.4: 2 residues within 4Å: Chain A: S.14, Q.15 Ligand excluded by PLIP IOD.5: 1 residues within 4Å: Chain A: N.100 Ligand excluded by PLIP IOD.6: 2 residues within 4Å: Chain A: I.25, T.76 Ligand excluded by PLIP IOD.7: 4 residues within 4Å: Chain A: E.43, K.52, F.53, T.54 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sharma, A. et al., Utility of anion and cation combinations for phasing of protein structures. J.Struct.Funct.Genom. (2012)

Release Date

2012-06-20

Peptides

Fatty acid-binding protein, liver: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fatty acid-binding protein, liver

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