SMTL ID : 3b2t.1 (1 other biounit)

Structure of phosphotransferase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-tetramer

Ligands

8 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 6 residues within 4Å: Chain A: T.204, N.205, G.206, R.207 Chain B: K.69 Chain C: R.221 8 PLIP interactions: 3 interactions with chain B, 4 interactions with chain A, 1 interactions with chain C Water bridges: B:K.69, B:K.69, A:T.204 Salt bridges: B:K.69, C:R.221 Hydrogen bonds: A:T.204, A:T.204, A:G.206 PO4.2: 4 residues within 4Å: Chain A: R.264, R.280, W.283, H.284 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:W.283 Water bridges: A:R.264, A:A.285 Salt bridges: A:R.264, A:R.280 PO4.4: 6 residues within 4Å: Chain A: K.69 Chain B: T.204, N.205, G.206, R.207 Chain D: R.221 5 PLIP interactions: 2 interactions with chain B, 1 interactions with chain D, 2 interactions with chain A Hydrogen bonds: B:T.204, B:G.206 Salt bridges: D:R.221, A:K.69 Water bridges: A:K.69 PO4.5: 4 residues within 4Å: Chain B: R.264, R.280, W.283, H.284 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:W.283 Water bridges: B:R.264, B:R.264, B:A.285 Salt bridges: B:R.264, B:R.280, B:H.284 PO4.7: 6 residues within 4Å: Chain A: R.221 Chain C: T.204, N.205, G.206, R.207 Chain D: K.69 8 PLIP interactions: 1 interactions with chain A, 4 interactions with chain C, 3 interactions with chain D Salt bridges: A:R.221, D:K.69 Hydrogen bonds: C:T.204, C:T.204, C:G.206 Water bridges: C:T.204, D:K.69, D:K.69 PO4.8: 4 residues within 4Å: Chain C: R.264, R.280, W.283, H.284 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:W.283 Water bridges: C:R.264, C:A.285 Salt bridges: C:R.264, C:R.280 PO4.10: 6 residues within 4Å: Chain B: R.221 Chain C: K.69 Chain D: T.204, N.205, G.206, R.207 5 PLIP interactions: 2 interactions with chain D, 1 interactions with chain B, 2 interactions with chain C Hydrogen bonds: D:T.204, D:G.206 Salt bridges: B:R.221, C:K.69 Water bridges: C:K.69 PO4.11: 4 residues within 4Å: Chain D: R.264, R.280, W.283, H.284 7 PLIP interactions: 7 interactions with chain D Hydrogen bonds: D:W.283 Water bridges: D:R.264, D:R.264, D:A.285 Salt bridges: D:R.264, D:R.280, D:H.284

4 x M33: 5'-O-[(S)-hydroxy{[(S)-hydroxy(methyl)phosphoryl]oxy}phosphoryl]adenosine(Non-covalent)

M33.3: 13 residues within 4Å: Chain A: L.30, G.31, E.32, G.33, V.38, A.58, V.107, E.108, Y.109, A.110, N.114, L.176, D.187 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.32, A:E.108, A:A.110, A:N.114, A:N.114, A:D.187 M33.6: 13 residues within 4Å: Chain B: L.30, V.38, A.58, K.60, I.91, V.107, E.108, Y.109, A.110, N.114, N.174, L.176, D.187 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:E.108, B:A.110, B:N.114, B:N.114, B:D.187 Water bridges: B:K.60 Salt bridges: B:K.60 M33.9: 13 residues within 4Å: Chain C: L.30, G.31, E.32, G.33, V.38, A.58, V.107, E.108, Y.109, A.110, N.114, L.176, D.187 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:E.32, C:E.108, C:A.110, C:N.114, C:N.114, C:D.187 M33.12: 13 residues within 4Å: Chain D: L.30, V.38, A.58, K.60, I.91, V.107, E.108, Y.109, A.110, N.114, N.174, L.176, D.187 7 PLIP interactions: 7 interactions with chain D Hydrogen bonds: D:E.108, D:A.110, D:N.114, D:N.114, D:D.187 Water bridges: D:K.60 Salt bridges: D:K.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lew, E.D. et al., Structural basis for reduced FGFR2 activity in LADD syndrome: Implications for FGFR autoinhibition and activation. Proc.Natl.Acad.Sci.Usa (2007)

Release Date

2008-02-26

Peptides

Fibroblast growth factor receptor 2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Fibroblast growth factor receptor 2

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