SMTL ID : 3b2w.1

Crystal structure of pyrimidine amide 11 bound to Lck

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x 9NH: N-[5-({[2-fluoro-3-(trifluoromethyl)phenyl]amino}carbonyl)-2-methylphenyl]-4-methoxy-2-[(4-piperazin-1-ylphenyl)amino]pyrimidine-5-carboxamide(Non-covalent)

9NH.1: 19 residues within 4Å: Chain A: V.34, A.46, K.48, E.63, M.67, L.70, L.75, V.76, I.89, T.91, E.92, Y.93, M.94, G.97, L.146, I.155, A.156, D.157, F.158 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:E.63, A:I.89, A:T.91, A:Y.93, A:L.146, A:F.158, A:F.158 Hydrogen bonds: A:E.63, A:T.91, A:M.94, A:M.94, A:D.157, A:D.157 pi-Cation interactions: A:K.48 Halogen bonds: A:V.76, A:I.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Deak, H.L. et al., N-(3-(phenylcarbamoyl)arylpyrimidine)-5-carboxamides as potent and selective inhibitors of Lck: structure, synthesis and SAR. Bioorg.Med.Chem.Lett. (2008)

Release Date

2007-12-18

Peptides

Proto-oncogene tyrosine-protein kinase LCK: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Proto-oncogene tyrosine-protein kinase LCK

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