SMTL ID : 3b3j.1

The 2.55 A crystal structure of the apo catalytic domain of coactivator-associated arginine methyl transferase I(CARM1:28-507, residues 28-146 and 479-507 not ordered)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

monomer

Ligands

6 x BEN: BENZAMIDINE(Non-functional Binders)

BEN.1: 6 residues within 4Å: Chain A: E.307, R.310, D.423, L.440, L.441, D.442 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.440, A:L.440, A:D.442 Hydrogen bonds: A:E.307, A:D.442 BEN.2: 5 residues within 4Å: Chain A: F.126, Y.129, L.130, Q.138, F.448 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.126, A:Y.129, A:L.130, A:F.448, A:F.448 Hydrogen bonds: A:F.126, A:Q.138 Water bridges: A:R.142, A:R.142 BEN.3: 4 residues within 4Å: Chain A: I.415, D.423, S.425, L.440 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.415, A:L.440 Hydrogen bonds: A:D.423, A:D.423 BEN.4: 6 residues within 4Å: Chain A: F.126, Y.127, V.314, W.389, Y.390, Q.391 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.126 Hydrogen bonds: A:W.389, A:Q.391, A:Q.391 pi-Stacking: A:F.238 BEN.5: 5 residues within 4Å: Chain A: K.250, L.253, K.254, L.334, E.335 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.253 Hydrogen bonds: A:E.335 BEN.6: 7 residues within 4Å: Chain A: L.237, L.243, G.264, D.265, F.333, I.344, F.365 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.243, A:I.344, A:F.365

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Troffer-Charlier, N. et al., Functional insights from structures of coactivator-associated arginine methyltransferase 1 domains. Embo J. (2007)

Release Date

2007-11-06

Peptides

Histone-arginine methyltransferase CARM1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone-arginine methyltransferase CARM1