SMTL ID : 3b59.1

Crystal structure of the Mn(II)-bound glyoxalase from Novosphingobium aromaticivorans

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.53 Å

Oligo State

homo-hexamer

Ligands

6 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: H.144, H.198, Y.239, E.249 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.144, A:H.198, A:E.249, H2O.3, H2O.3 MN.2: 4 residues within 4Å: Chain B: H.144, H.198, Y.239, E.249 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.144, B:H.198, B:E.249, H2O.4, H2O.4 MN.3: 4 residues within 4Å: Chain C: H.144, H.198, Y.239, E.249 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:H.198, C:Y.239, C:E.249, H2O.6, H2O.6 MN.4: 4 residues within 4Å: Chain D: H.144, H.198, Y.239, E.249 6 PLIP interactions: 4 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:H.144, D:H.198, D:Y.239, D:E.249, H2O.7, H2O.7 MN.5: 4 residues within 4Å: Chain E: H.144, H.198, Y.239, E.249 5 PLIP interactions: 3 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:H.144, E:H.198, E:Y.239, H2O.8, H2O.8 MN.6: 5 residues within 4Å: Chain F: H.144, H.198, A.200, Y.239, E.249 5 PLIP interactions: 3 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:H.144, F:H.198, F:Y.239, H2O.9, H2O.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Madegowda, M. et al., Crystal structure of the Mn(II)-bound glyoxalase from Novosphingobium aromaticivorans. To be Published

Release Date

2007-11-06

Peptides

Glyoxalase/bleomycin resistance protein/dioxygenase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Glyoxalase/bleomycin resistance protein/dioxygenase