SMTL ID : 3b5e.1 (1 other biounit)

Crystal structure of carboxylesterase (NP_108484.1) from Mesorhizobium loti at 1.75 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: S.39, R.73, R.77, F.83, S.119, N.120 Ligands: EDO.7 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.39, A:S.39, A:N.120 Water bridges: A:Q.68, A:N.120, A:N.120 Salt bridges: A:R.73, A:R.77

11 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain A: L.89, A.90 No protein-ligand interaction detected (PLIP) EDO.3: 3 residues within 4Å: Chain A: P.67, Q.68, E.69 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.69 EDO.4: 3 residues within 4Å: Chain A: G.198, H.199, D.200 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:A.168, A:G.198, A:H.199, A:D.200, A:D.200 Water bridges: A:E.170 EDO.5: 4 residues within 4Å: Chain A: V.151, L.182, R.185, H.186 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.185 Water bridges: A:V.151, A:P.152, A:R.185 EDO.6: 4 residues within 4Å: Chain A: A.153, T.154, R.185, H.186 2 PLIP interactions: 2 interactions with chain A Water bridges: A:A.157, A:H.186 EDO.7: 8 residues within 4Å: Chain A: S.119, N.120, N.123, R.143, P.144, M.145, Y.172 Ligands: SO4.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.123, A:R.143 Water bridges: A:N.120 EDO.8: 6 residues within 4Å: Chain A: L.23, G.24, K.27, R.51, P.55, A.57 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.51, A:R.51, A:A.57 EDO.9: 2 residues within 4Å: Chain A: R.63, F.72 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.63, A:R.63 EDO.10: 4 residues within 4Å: Chain A: V.41, T.45, Y.118, I.201 3 PLIP interactions: 3 interactions with chain A Water bridges: A:G.38, A:T.45, A:I.201 EDO.11: 1 residues within 4Å: Chain A: R.105 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.105, A:R.105 EDO.12: 5 residues within 4Å: Chain A: I.78, F.83, E.84, Q.85, K.86 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:F.83, A:Q.85, A:K.86 Water bridges: A:Q.85

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of carboxylesterase (NP_108484.1) from Mesorhizobium loti at 1.75 A resolution. To be published

Release Date

2007-11-13

Peptides

Mll8374 protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mll8374 protein

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