SMTL ID : 3b76.1

Crystal structure of the third PDZ domain of human ligand-of-numb protein-X (LNX1) in complex with the C-terminal peptide from the coxsackievirus and adenovirus receptor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-dimer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: A.46, H.48, W.51, D.52 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.46, A:D.52

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 7 residues within 4Å: Chain A: W.51 Chain B: P.54, I.55, L.78, L.79, L.86, T.87 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:I.55, B:L.78 Water bridges: B:T.87 EDO.3: 3 residues within 4Å: Chain B: P.34, S.102, S.103 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.103 Water bridges: B:S.102, B:S.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ugochukwu, E. et al., Crystal structure of the third PDZ domain of human ligand-of-numb protein-X (LNX1) in complex with the C-terminal peptide from the coxsackievirus and adenovirus receptor. To be Published

Release Date

2007-11-13

Peptides

E3 ubiquitin-protein ligase LNX: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

E3 ubiquitin-protein ligase LNX