SMTL ID : 3b7r.1

Leukotriene A4 Hydrolase Complexed with Inhibitor RB3040

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.81 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.301, H.305, E.324, Y.389 Ligands: BIR.4 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.301, A:H.305, A:E.324, A:E.324

1 x YB: YTTERBIUM (III) ION(Non-covalent)

YB.2: 1 residues within 4Å: Chain A: D.487 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.487, A:D.487, H2O.18, H2O.21, H2O.24

1 x IMD: IMIDAZOLE(Non-covalent)

IMD.3: 7 residues within 4Å: Chain A: G.350, G.353, E.354, N.357, E.507, A.510, Q.514 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.354, A:N.357, A:E.507 Water bridges: A:G.353

1 x BIR: N-[3-[(1-AMINOETHYL)(HYDROXY)PHOSPHORYL]-2-(1,1'-BIPHENYL-4-YLMETHYL)PROPANOYL]ALANINE(Non-covalent)

BIR.4: 17 residues within 4Å: Chain A: Q.142, Y.273, G.274, G.275, M.276, E.277, N.297, V.298, H.301, E.302, H.305, E.324, Y.384, Y.389, R.569, K.571 Ligands: ZN.1 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:V.298 Hydrogen bonds: A:Q.142, A:G.274, A:G.275, A:E.324, A:Y.384, A:Y.384 Water bridges: A:K.571 Salt bridges: A:R.569, A:K.571 pi-Stacking: A:H.301 pi-Cation interactions: A:K.571

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tholander, F. et al., Structure-based dissection of the active site chemistry of leukotriene a4 hydrolase: implications for m1 aminopeptidases and inhibitor design. Chem.Biol. (2008)

Release Date

2008-09-16

Peptides

Leukotriene A-4 hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

Leukotriene A-4 hydrolase

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