SMTL ID : 3b8z.1 (1 other biounit)

High Resolution Crystal Structure of the Catalytic Domain of ADAMTS-5 (Aggrecanase-2)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.147, H.151, H.157 Ligands: 294.5 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.147, A:H.151, A:H.157

3 x CA: CALCIUM ION(Non-covalent)

CA.2: 6 residues within 4Å: Chain A: E.7, D.90, D.97, C.208, D.211 Ligands: CA.3 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.7, A:D.90, A:D.97, A:C.208, H2O.1 CA.3: 4 residues within 4Å: Chain A: E.7, D.90, D.211 Ligands: CA.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.7, A:D.90, A:D.90, A:D.211, H2O.1 CA.4: 5 residues within 4Å: Chain A: D.106, L.107, C.113, T.115, E.135 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.106, A:L.107, A:C.113, A:T.115, A:E.135, H2O.1

1 x 294: N-hydroxy-4-({4-[4-(trifluoromethyl)phenoxy]phenyl}sulfonyl)tetrahydro-2H-pyran-4-carboxamide(Non-covalent)

294.5: 20 residues within 4Å: Chain A: H.110, D.114, T.115, L.116, G.117, H.140, F.143, T.144, H.147, E.148, H.151, H.157, L.175, S.177, S.178, L.180, T.181, S.182, I.183 Ligands: ZN.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.143, A:T.144, A:H.147, A:L.180, A:L.180, A:I.183 pi-Stacking: A:H.147

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shieh, H.S. et al., High resolution crystal structure of the catalytic domain of ADAMTS-5 (aggrecanase-2). J.Biol.Chem. (2008)

Release Date

2007-12-11

Peptides

protein ADAMTS-5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

protein ADAMTS-5

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