SMTL ID : 3b90.2 (3 other biounits)

Crystal Structure of the Catalytic Domain of Pectate Lyase PelI from Erwinia chrysanthemi

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.11 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: D.73, I.74, N.95, Y.100 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.73, A:I.74, A:Y.100

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: D.55, E.76, D.77, T.80 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.55, A:D.55, A:E.76, A:D.77, H2O.6 ZN.3: 2 residues within 4Å: Chain A: H.58, D.60 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.58, A:D.60, A:D.60, H2O.6

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 4 residues within 4Å: Chain A: K.131, R.134, F.194, K.206 6 PLIP interactions: 6 interactions with chain A Water bridges: A:R.134, A:E.192, A:E.192 Salt bridges: A:K.131, A:R.134, A:K.206

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Creze, C. et al., The Crystal Structure of Pectate Lyase PelI from Soft Rot Pathogen Erwinia chrysanthemi in Complex with Its Substrate. J.Biol.Chem. (2008)

Release Date

2008-04-29

Peptides

Endo-pectate lyase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Endo-pectate lyase

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