SMTL ID : 3ba0.1

Crystal structure of full-length human MMP-12

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.113, E.114, H.117, H.123 Ligands: HAE.7 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:H.117, A:H.123, HAE.7 ZN.2: 4 residues within 4Å: Chain A: H.63, D.65, H.78, H.91 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.63, A:D.65, A:D.65, A:H.78, A:H.91

4 x CA: CALCIUM ION(Non-covalent)

CA.3: 3 residues within 4Å: Chain A: D.53, G.87, D.89 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.53, A:G.87 CA.4: 3 residues within 4Å: Chain A: D.19, E.94, E.96 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.19, A:E.94, A:E.96 CA.5: 7 residues within 4Å: Chain A: D.70, G.71, K.72, G.73, I.75, D.93, E.96 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.70, A:G.73, A:I.75, A:D.93, A:E.96 CA.6: 4 residues within 4Å: Chain A: D.184, E.228, D.276, D.325 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.184, A:E.228, A:D.276, A:D.325

1 x HAE: ACETOHYDROXAMIC ACID(Non-covalent)

HAE.7: 6 residues within 4Å: Chain A: A.77, H.78, A.79, E.114, H.117 Ligands: ZN.1 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:H.78 Hydrogen bonds: A:E.114

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bertini, I. et al., Evidence of reciprocal reorientation of the catalytic and hemopexin-like domains of full-length MMP-12. J.Am.Chem.Soc. (2008)

Release Date

2008-07-29

Peptides

Macrophage metalloelastase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Macrophage metalloelastase