- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.15 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)
- 7 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 2 residues within 4Å:- Chain A: D.128, E.132
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.132
- Water bridges: A:D.128, A:D.128
GOL.3: 6 residues within 4Å:- Chain A: T.2, N.4, N.77, I.133, N.134, D.157
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:T.2, A:N.4, A:N.77, A:N.134
- Water bridges: A:N.134
GOL.4: 7 residues within 4Å:- Chain A: Y.79, V.87, E.122, K.124, L.129, E.132, I.133
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:Y.79, A:E.132, A:E.132
- Water bridges: A:E.132
GOL.5: 6 residues within 4Å:- Chain A: N.71, H.72, K.74, P.92, E.93
- Chain B: K.188
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.71, A:P.92
GOL.7: 5 residues within 4Å:- Chain B: Y.79, K.89, E.122, E.132, I.133
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:Y.79, B:K.89, B:E.122, B:E.132
GOL.8: 7 residues within 4Å:- Chain A: Y.201, S.202, F.205
- Chain B: P.150, I.198, Y.201, S.202
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:I.198
GOL.9: 5 residues within 4Å:- Chain B: T.2, N.4, I.133, N.134, D.157
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:N.4, B:I.133
- Water bridges: B:N.134
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
-
Taylor, A.B. et al., The crystal structure of Nep1 reveals an extended SPOUT-class methyltransferase fold and a pre-organized SAM-binding site. Nucleic Acids Res. (2008)
- Release Date
- 2008-02-05
- Peptides
- Ribosome biogenesis protein NEP1-like: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.15 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)
- 7 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
-
Taylor, A.B. et al., The crystal structure of Nep1 reveals an extended SPOUT-class methyltransferase fold and a pre-organized SAM-binding site. Nucleic Acids Res. (2008)
- Release Date
- 2008-02-05
- Peptides
- Ribosome biogenesis protein NEP1-like: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B