SMTL ID : 3bbj.1

CRYSTAL STRUCTURE OF A PUTATIVE THIOESTERASE II (TFU_2367) FROM THERMOBIFIDA FUSCA YX AT 2.45 A RESOLUTION

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.16 Å

Oligo State

homo-dimer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.67, R.99 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Salt bridges: B:K.82, A:R.67 Hydrogen bonds: A:R.99 SO4.6: 5 residues within 4Å: Chain A: R.272 Chain B: G.84, R.85, T.86, V.87 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:R.85, B:T.86, B:V.87 Salt bridges: B:K.82, A:R.272 SO4.7: 2 residues within 4Å: Chain B: R.67, R.99 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Salt bridges: B:R.67, A:K.82

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: K.82, R.83 Chain B: R.67 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: I.32, G.33, T.34, A.35 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain A: K.82, G.84, R.85 Ligands: EDO.5 Ligand excluded by PLIP CL.8: 2 residues within 4Å: Chain A: R.67 Chain B: R.83 Ligand excluded by PLIP

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 5 residues within 4Å: Chain A: G.84, R.85, T.86, V.87 Ligands: CL.4 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.86, A:V.87, A:V.87 Water bridges: A:T.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of putative thioesterase II (YP_290423.1) from Thermobifida fusca YX at 2.45 A resolution. To be published

Release Date

2007-11-20

Peptides

Putative thioesterase II: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Putative thioesterase II