SMTL ID : 3bby.1

Crystal structure of glutathione S-transferase (NP_416804.1) from Escherichia coli K12 at 1.85 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-dimer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain A: D.96, E.98 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.96, A:E.98, H2O.5, H2O.6, H2O.6 CA.2: 1 residues within 4Å: Chain A: E.90 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.90, H2O.1, H2O.1, H2O.4 CA.6: 2 residues within 4Å: Chain B: D.96, E.98 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.96, B:E.98, H2O.13, H2O.14, H2O.15 CA.7: 1 residues within 4Å: Chain B: E.90 4 PLIP interactions: 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:E.90, H2O.9, H2O.10, H2O.13

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 6 residues within 4Å: Chain A: A.6, I.7, T.8, Q.64, I.65, D.66 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.8, A:T.8 Water bridges: A:I.65 ACT.8: 6 residues within 4Å: Chain B: A.6, I.7, T.8, Q.64, I.65, D.66 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:T.8 Water bridges: B:I.65

4 x ETX: 2-ETHOXYETHANOL(Non-covalent)

ETX.4: 4 residues within 4Å: Chain A: W.10, R.59, L.62, Q.64 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.62 Hydrogen bonds: A:Q.64 ETX.5: 9 residues within 4Å: Chain A: L.62, E.69, L.70, S.71 Chain B: R.102, Q.105, M.149, H.152, L.153 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:L.153 Hydrogen bonds: B:Q.105, A:S.71 ETX.9: 4 residues within 4Å: Chain B: W.10, R.59, L.62, Q.64 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:L.62 Hydrogen bonds: B:Q.64 ETX.10: 9 residues within 4Å: Chain A: R.102, Q.105, M.149, H.152, L.153 Chain B: L.62, E.69, L.70, S.71 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:L.153 Hydrogen bonds: A:Q.105, B:S.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of glutathione S-transferase (NP_416804.1) from Escherichia coli K12 at 1.85 A resolution. To be published

Release Date

2007-11-20

Peptides

Uncharacterized GST-like protein yfcF: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Uncharacterized GST-like protein yfcF