SMTL ID : 3bhb.1

Crystal Structure of KMD Phosphopeptide Bound to Human Class I MHC HLA-A2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-oligomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 8 residues within 4Å: Chain A: W.204, L.206, R.234, Q.242 Chain B: Y.9, S.10, H.12, P.13 5 PLIP interactions: 1 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:R.234, B:S.10, B:H.12, B:M.98 Water bridges: B:M.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mohammed, F. et al., Phosphorylation-dependent interaction between antigenic peptides and MHC class I: a molecular basis for the presentation of transformed self. Nat.Immunol. (2008)

Release Date

2008-10-21

Peptides

HLA class I histocompatibility antigen, A-2 alpha chain: A
Beta-2-microglobulin: B
decameric peptide from NEDD4-binding protein 2: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

HLA class I histocompatibility antigen, A-2 alpha chain

Beta-2-microglobulin

decameric peptide from NEDD4-binding protein 2

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