SMTL ID : 3bhn.1

Crystal structure of a dj-1/pfpi-like protein (shew_2856) from shewanella loihica pv-4 at 1.76 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.76 Å

Oligo State

homo-dimer

Ligands

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: S.111, R.112, Q.113, L.114, N.163 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.111, A:N.163 Water bridges: A:L.114 EDO.2: 5 residues within 4Å: Chain A: F.28, T.57, A.96, D.99, F.102 1 PLIP interactions: 1 interactions with chain A Water bridges: A:D.29 EDO.3: 5 residues within 4Å: Chain A: F.36, I.54, V.69 Chain B: L.65, M.67 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Water bridges: A:N.40, A:N.40, B:L.65 EDO.4: 5 residues within 4Å: Chain B: S.111, R.112, Q.113, L.114, N.163 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.111, B:N.163 Water bridges: B:L.114 EDO.5: 5 residues within 4Å: Chain B: F.28, T.57, A.96, D.99, F.102 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:T.57, B:D.99 Water bridges: B:D.29 EDO.6: 5 residues within 4Å: Chain A: L.65, M.67 Chain B: F.36, I.54, V.69 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Water bridges: A:L.65, B:N.40, B:N.40

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of DJ-1 like Protein (YP_001094981.1) from Shewanella loihica PV-4 at 1.76 A resolution. To be published

Release Date

2007-12-11

Peptides

ThiJ/PfpI domain protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

ThiJ/PfpI domain protein