SMTL ID : 3bib.1

Tim-4 in complex with phosphatidylserine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 5 residues within 4Å: Chain A: V.94, G.96, N.99, D.100 Ligands: PSF.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.94, A:N.99, A:D.100 Water bridges: A:V.94

1 x PSF: 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE(Non-covalent)

PSF.2: 11 residues within 4Å: Chain A: N.39, S.40, K.41, R.91, E.93, G.96, W.97, F.98, N.99, D.100 Ligands: NA.1 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:F.98 Hydrogen bonds: A:K.41, A:E.93, A:F.98, A:N.99, A:D.100, A:D.100 Water bridges: A:N.39, A:V.94, A:V.94 Salt bridges: A:K.41, A:R.91, A:R.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Santiago, C. et al., Structures of T Cell Immunoglobulin Mucin Protein 4 Show a Metal-Ion-Dependent Ligand Binding Site where Phosphatidylserine Binds. Immunity (2007)

Release Date

2008-01-01

Peptides

T-cell immunoglobulin and mucin domain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

T-cell immunoglobulin and mucin domain-containing protein 4

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