SMTL ID : 3biy.1

Crystal structure of p300 histone acetyltransferase domain in complex with a bisubstrate inhibitor, Lys-CoA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

5 x BR: BROMIDE ION(Non-covalent)(Non-functional Binders)

BR.1: 3 residues within 4Å: Chain A: K.140, R.192, I.193 Ligand excluded by PLIP BR.2: 2 residues within 4Å: Chain A: L.337, Q.375 Ligand excluded by PLIP BR.3: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP BR.4: 1 residues within 4Å: Chain A: C.122 Ligand excluded by PLIP BR.5: 2 residues within 4Å: Chain A: P.120, K.121 Ligand excluded by PLIP

1 x 01K: [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]methyl (3R,20R)-20-carbamoyl-3-hydroxy-2,2-dimethyl-4,8,14,22-tetraoxo-12-thia-5,9,15,21-tetraazatricos-1-yl dihydrogen diphosphate(Non-covalent)

01K.6: 22 residues within 4Å: Chain A: S.110, Y.111, L.112, D.113, S.114, R.124, T.125, Y.128, W.150, A.151, C.152, P.153, P.154, Y.160, Q.169, K.170, I.171, P.172, R.176, L.177, W.180, Y.181 33 PLIP interactions: 33 interactions with chain A Hydrophobic interactions: A:L.112, A:Y.128, A:W.150, A:W.150, A:L.177 Hydrogen bonds: A:Y.111, A:L.112, A:L.112, A:D.113, A:S.114, A:W.150, A:Q.169, A:I.171, A:K.173, A:W.180 Water bridges: A:S.114, A:R.124, A:R.124, A:R.124, A:R.124, A:R.124, A:R.124, A:S.155, A:D.158, A:Y.160, A:K.173, A:R.176, A:R.176, A:R.176 Salt bridges: A:R.124, A:R.124 pi-Cation interactions: A:R.176, A:R.176

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, X. et al., The structural basis of protein acetylation by the p300/CBP transcriptional coactivator. Nature (2008)

Release Date

2008-02-12

Peptides

Histone acetyltransferase p300: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone acetyltransferase p300