- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.33 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 4 x ZN: ZINC ION(Non-covalent)
ZN.4: 6 residues within 4Å:- Chain A: H.82, H.84, H.87, H.157, D.179
- Ligands: ZN.5
5 PLIP interactions:4 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:H.82, A:H.84, A:H.157, A:D.179, H2O.4
ZN.5: 6 residues within 4Å:- Chain A: N.31, D.86, H.87, D.179, H.405
- Ligands: ZN.4
5 PLIP interactions:4 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.86, A:H.87, A:D.179, A:H.405, H2O.4
ZN.11: 6 residues within 4Å:- Chain B: H.82, H.84, H.87, H.157, D.179
- Ligands: ZN.12
5 PLIP interactions:4 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:H.82, B:H.84, B:H.157, B:D.179, H2O.194
ZN.12: 6 residues within 4Å:- Chain B: N.31, D.86, H.87, D.179, H.405
- Ligands: ZN.11
5 PLIP interactions:4 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:D.86, B:H.87, B:D.179, B:H.405, H2O.194
- 4 x GOL: GLYCEROL(Non-functional Binders)
GOL.6: 5 residues within 4Å:- Chain A: E.216, Q.386, N.413, L.417
- Chain B: Y.376
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:Q.386, A:N.413, A:N.413, B:Y.376
GOL.7: 3 residues within 4Å:- Chain A: T.185, M.225, K.229
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:T.185, A:K.229
GOL.13: 5 residues within 4Å:- Chain A: Y.376
- Chain B: E.216, Q.386, N.413, L.417
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:Q.386, B:N.413, B:N.413, A:Y.376
GOL.14: 3 residues within 4Å:- Chain B: T.185, M.225, K.229
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:T.185, B:K.229
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- de la Sierra-Gallay, I.L. et al., Structural insights into the dual activity of RNase J. Nat.Struct.Mol.Biol. (2008)
- Release Date
- 2008-01-22
- Peptides
- Metal dependent hydrolase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.33 Å
- Oligo State
- homo-dimer
- Ligands
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 4 x ZN: ZINC ION(Non-covalent)
- 4 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- de la Sierra-Gallay, I.L. et al., Structural insights into the dual activity of RNase J. Nat.Struct.Mol.Biol. (2008)
- Release Date
- 2008-01-22
- Peptides
- Metal dependent hydrolase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A