SMTL ID : 3bkb.1

Crystal structure of human Feline Sarcoma Viral Oncogene Homologue (v-FES)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.134, R.136 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.134, A:R.134 Salt bridges: A:R.134, A:R.136 SO4.2: 4 residues within 4Å: Chain A: R.22, R.38, S.40 Ligands: EDO.11 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.40 Salt bridges: A:R.22, A:R.38 SO4.3: 7 residues within 4Å: Chain A: K.158, R.237, R.261, Y.268, A.270, S.271, L.274 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:S.271, A:L.274 Water bridges: A:K.158, A:R.261, A:R.261, A:Y.268, A:Y.268, A:G.272, A:G.272 Salt bridges: A:K.158, A:R.237, A:R.261

8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 4 residues within 4Å: Chain A: A.163, R.164, K.167, V.180 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.167 Water bridges: A:K.167 EDO.5: 9 residues within 4Å: Chain A: V.279, K.280, T.282, A.283, P.284, L.287, W.299, T.324, V.328 No protein-ligand interaction detected (PLIP) EDO.6: 6 residues within 4Å: Chain A: D.238, A.240, R.242, N.243, P.278, W.281 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.238, A:N.243 Water bridges: A:D.238, A:R.242 EDO.7: 2 residues within 4Å: Chain A: R.204, S.314 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.204, A:R.204, A:S.314 Water bridges: A:S.314 EDO.8: 4 residues within 4Å: Chain A: H.113, L.116, L.118, Y.188 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.113, A:Y.188, A:Y.188 Water bridges: A:L.118 EDO.9: 2 residues within 4Å: Chain A: D.65, L.67 No protein-ligand interaction detected (PLIP) EDO.10: 3 residues within 4Å: Chain A: I.122, Q.195 Ligands: STU.12 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.195 EDO.11: 7 residues within 4Å: Chain A: R.22, S.40, K.43, V.47, H.58, I.60 Ligands: SO4.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.40, A:S.40, A:H.58

1 x STU: STAUROSPORINE(Non-covalent)

STU.12: 20 residues within 4Å: Chain A: I.122, G.123, R.124, G.125, V.130, A.143, K.145, E.162, M.191, E.192, L.193, V.194, G.197, D.198, R.242, N.243, L.245, S.255, D.256 Ligands: EDO.10 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.122, A:A.143, A:K.145, A:L.193, A:L.245, A:L.245, A:D.256 Hydrogen bonds: A:V.194, A:R.242 Water bridges: A:R.124, A:R.242

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Filippakopoulos, P. et al., Structural Coupling of SH2-Kinase Domains Links Fes and Abl Substrate Recognition and Kinase Activation. Cell(Cambridge,Mass.) (2008)

Release Date

2007-12-25

Peptides

Proto-oncogene tyrosine-protein kinase Fes/Fps: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Proto-oncogene tyrosine-protein kinase Fes/Fps

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