SMTL ID : 3bkn.1

The structure of Mycobacterial bacterioferritin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.72 Å

Oligo State

homo-24-mer

Ligands

48 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: E.18, E.51, H.54, E.127 Ligands: ZN.2 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.18, A:E.18, A:E.51, A:H.54, A:E.127 ZN.2: 5 residues within 4Å: Chain A: E.51, E.94, E.127, H.130 Ligands: ZN.1 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.51, A:E.94, A:E.94, A:E.127, A:H.130 ZN.4: 4 residues within 4Å: Chain B: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.18, B:E.18, B:E.51, B:H.54, B:E.127 ZN.5: 4 residues within 4Å: Chain B: E.51, E.94, E.127, H.130 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.51, B:E.94, B:E.94, B:E.127, B:H.130 ZN.10: 4 residues within 4Å: Chain C: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:E.18, C:E.18, C:E.51, C:H.54, C:E.127 ZN.11: 5 residues within 4Å: Chain C: Y.25, E.51, E.94, E.127, H.130 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:E.51, C:E.94, C:E.94, C:E.127, C:H.130 ZN.14: 5 residues within 4Å: Chain D: E.18, E.51, H.54, E.127 Ligands: ZN.15 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:E.18, D:E.18, D:E.51, D:H.54, D:E.127 ZN.15: 5 residues within 4Å: Chain D: E.51, E.94, E.127, H.130 Ligands: ZN.14 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:E.51, D:E.94, D:E.94, D:E.127, D:H.130 ZN.17: 4 residues within 4Å: Chain E: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain E Metal complexes: E:E.18, E:E.18, E:E.51, E:H.54, E:E.127 ZN.18: 4 residues within 4Å: Chain E: E.51, E.94, E.127, H.130 5 PLIP interactions: 5 interactions with chain E Metal complexes: E:E.51, E:E.94, E:E.94, E:E.127, E:H.130 ZN.21: 4 residues within 4Å: Chain F: E.18, E.51, H.54, E.127 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:E.18, F:E.51, F:H.54, F:E.127 ZN.22: 5 residues within 4Å: Chain F: Y.25, E.51, E.94, E.127, H.130 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:E.51, F:E.94, F:E.127, F:H.130 ZN.24: 5 residues within 4Å: Chain G: E.18, E.51, H.54, E.127 Ligands: ZN.25 5 PLIP interactions: 5 interactions with chain G Metal complexes: G:E.18, G:E.18, G:E.51, G:H.54, G:E.127 ZN.25: 5 residues within 4Å: Chain G: E.51, E.94, E.127, H.130 Ligands: ZN.24 5 PLIP interactions: 5 interactions with chain G Metal complexes: G:E.51, G:E.94, G:E.94, G:E.127, G:H.130 ZN.26: 5 residues within 4Å: Chain H: E.18, E.51, H.54, E.127 Ligands: ZN.27 5 PLIP interactions: 5 interactions with chain H Metal complexes: H:E.18, H:E.18, H:E.51, H:H.54, H:E.127 ZN.27: 5 residues within 4Å: Chain H: E.51, E.94, E.127, H.130 Ligands: ZN.26 5 PLIP interactions: 5 interactions with chain H Metal complexes: H:E.51, H:E.94, H:E.94, H:E.127, H:H.130 ZN.30: 5 residues within 4Å: Chain I: E.18, E.51, H.54, E.127 Ligands: ZN.31 5 PLIP interactions: 5 interactions with chain I Metal complexes: I:E.18, I:E.18, I:E.51, I:H.54, I:E.127 ZN.31: 6 residues within 4Å: Chain I: Y.25, E.51, E.94, E.127, H.130 Ligands: ZN.30 5 PLIP interactions: 5 interactions with chain I Metal complexes: I:E.51, I:E.94, I:E.94, I:E.127, I:H.130 ZN.35: 4 residues within 4Å: Chain J: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain J Metal complexes: J:E.18, J:E.18, J:E.51, J:H.54, J:E.127 ZN.36: 4 residues within 4Å: Chain J: E.51, E.94, E.127, H.130 5 PLIP interactions: 5 interactions with chain J Metal complexes: J:E.51, J:E.94, J:E.94, J:E.127, J:H.130 ZN.39: 5 residues within 4Å: Chain K: E.18, E.51, H.54, E.127 Ligands: ZN.40 5 PLIP interactions: 5 interactions with chain K Metal complexes: K:E.18, K:E.18, K:E.51, K:H.54, K:E.127 ZN.40: 6 residues within 4Å: Chain K: Y.25, E.51, E.94, E.127, H.130 Ligands: ZN.39 5 PLIP interactions: 5 interactions with chain K Metal complexes: K:E.51, K:E.94, K:E.94, K:E.127, K:H.130 ZN.43: 5 residues within 4Å: Chain L: E.18, E.51, H.54, E.127 Ligands: ZN.44 5 PLIP interactions: 5 interactions with chain L Metal complexes: L:E.18, L:E.18, L:E.51, L:H.54, L:E.127 ZN.44: 5 residues within 4Å: Chain L: E.51, E.94, E.127, H.130 Ligands: ZN.43 4 PLIP interactions: 4 interactions with chain L Metal complexes: L:E.51, L:E.94, L:E.127, L:H.130 ZN.46: 5 residues within 4Å: Chain M: E.18, E.51, H.54, E.127 Ligands: ZN.47 5 PLIP interactions: 5 interactions with chain M Metal complexes: M:E.18, M:E.18, M:E.51, M:H.54, M:E.127 ZN.47: 5 residues within 4Å: Chain M: E.51, E.94, E.127, H.130 Ligands: ZN.46 5 PLIP interactions: 5 interactions with chain M Metal complexes: M:E.51, M:E.94, M:E.94, M:E.127, M:H.130 ZN.49: 4 residues within 4Å: Chain N: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain N Metal complexes: N:E.18, N:E.18, N:E.51, N:H.54, N:E.127 ZN.50: 4 residues within 4Å: Chain N: E.51, E.94, E.127, H.130 5 PLIP interactions: 5 interactions with chain N Metal complexes: N:E.51, N:E.94, N:E.94, N:E.127, N:H.130 ZN.55: 4 residues within 4Å: Chain O: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain O Metal complexes: O:E.18, O:E.18, O:E.51, O:H.54, O:E.127 ZN.56: 5 residues within 4Å: Chain O: Y.25, E.51, E.94, E.127, H.130 5 PLIP interactions: 5 interactions with chain O Metal complexes: O:E.51, O:E.94, O:E.94, O:E.127, O:H.130 ZN.59: 5 residues within 4Å: Chain P: E.18, E.51, H.54, E.127 Ligands: ZN.60 5 PLIP interactions: 5 interactions with chain P Metal complexes: P:E.18, P:E.18, P:E.51, P:H.54, P:E.127 ZN.60: 5 residues within 4Å: Chain P: E.51, E.94, E.127, H.130 Ligands: ZN.59 5 PLIP interactions: 5 interactions with chain P Metal complexes: P:E.51, P:E.94, P:E.94, P:E.127, P:H.130 ZN.62: 4 residues within 4Å: Chain Q: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain Q Metal complexes: Q:E.18, Q:E.18, Q:E.51, Q:H.54, Q:E.127 ZN.63: 4 residues within 4Å: Chain Q: E.51, E.94, E.127, H.130 5 PLIP interactions: 5 interactions with chain Q Metal complexes: Q:E.51, Q:E.94, Q:E.94, Q:E.127, Q:H.130 ZN.66: 4 residues within 4Å: Chain R: E.18, E.51, H.54, E.127 4 PLIP interactions: 4 interactions with chain R Metal complexes: R:E.18, R:E.51, R:H.54, R:E.127 ZN.67: 5 residues within 4Å: Chain R: Y.25, E.51, E.94, E.127, H.130 4 PLIP interactions: 4 interactions with chain R Metal complexes: R:E.51, R:E.94, R:E.127, R:H.130 ZN.69: 5 residues within 4Å: Chain S: E.18, E.51, H.54, E.127 Ligands: ZN.70 5 PLIP interactions: 5 interactions with chain S Metal complexes: S:E.18, S:E.18, S:E.51, S:H.54, S:E.127 ZN.70: 5 residues within 4Å: Chain S: E.51, E.94, E.127, H.130 Ligands: ZN.69 5 PLIP interactions: 5 interactions with chain S Metal complexes: S:E.51, S:E.94, S:E.94, S:E.127, S:H.130 ZN.71: 5 residues within 4Å: Chain T: E.18, E.51, H.54, E.127 Ligands: ZN.72 5 PLIP interactions: 5 interactions with chain T Metal complexes: T:E.18, T:E.18, T:E.51, T:H.54, T:E.127 ZN.72: 5 residues within 4Å: Chain T: E.51, E.94, E.127, H.130 Ligands: ZN.71 5 PLIP interactions: 5 interactions with chain T Metal complexes: T:E.51, T:E.94, T:E.94, T:E.127, T:H.130 ZN.75: 5 residues within 4Å: Chain U: E.18, E.51, H.54, E.127 Ligands: ZN.76 5 PLIP interactions: 5 interactions with chain U Metal complexes: U:E.18, U:E.18, U:E.51, U:H.54, U:E.127 ZN.76: 6 residues within 4Å: Chain U: Y.25, E.51, E.94, E.127, H.130 Ligands: ZN.75 5 PLIP interactions: 5 interactions with chain U Metal complexes: U:E.51, U:E.94, U:E.94, U:E.127, U:H.130 ZN.80: 4 residues within 4Å: Chain V: E.18, E.51, H.54, E.127 5 PLIP interactions: 5 interactions with chain V Metal complexes: V:E.18, V:E.18, V:E.51, V:H.54, V:E.127 ZN.81: 4 residues within 4Å: Chain V: E.51, E.94, E.127, H.130 5 PLIP interactions: 5 interactions with chain V Metal complexes: V:E.51, V:E.94, V:E.94, V:E.127, V:H.130 ZN.84: 5 residues within 4Å: Chain W: E.18, E.51, H.54, E.127 Ligands: ZN.85 5 PLIP interactions: 5 interactions with chain W Metal complexes: W:E.18, W:E.18, W:E.51, W:H.54, W:E.127 ZN.85: 6 residues within 4Å: Chain W: Y.25, E.51, E.94, E.127, H.130 Ligands: ZN.84 5 PLIP interactions: 5 interactions with chain W Metal complexes: W:E.51, W:E.94, W:E.94, W:E.127, W:H.130 ZN.88: 5 residues within 4Å: Chain X: E.18, E.51, H.54, E.127 Ligands: ZN.89 5 PLIP interactions: 5 interactions with chain X Metal complexes: X:E.18, X:E.18, X:E.51, X:H.54, X:E.127 ZN.89: 5 residues within 4Å: Chain X: E.51, E.94, E.127, H.130 Ligands: ZN.88 4 PLIP interactions: 4 interactions with chain X Metal complexes: X:E.51, X:E.94, X:E.127, X:H.130

24 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 3 residues within 4Å: Chain A: D.66 Chain B: N.34 Chain K: D.132 No protein-ligand interaction detected (PLIP) MG.6: 1 residues within 4Å: Chain Q: D.66 No protein-ligand interaction detected (PLIP) MG.7: 2 residues within 4Å: Chain B: D.66 Chain G: Q.139 No protein-ligand interaction detected (PLIP) MG.9: 3 residues within 4Å: Chain A: D.132 Chain C: N.34 Chain D: D.66 No protein-ligand interaction detected (PLIP) MG.12: 3 residues within 4Å: Chain C: D.66 Chain D: N.34 Chain F: D.132 No protein-ligand interaction detected (PLIP) MG.19: 3 residues within 4Å: Chain E: D.132 Chain S: D.66 Chain T: N.34 1 PLIP interactions: 1 interactions with chain S Metal complexes: S:D.66 MG.23: 3 residues within 4Å: Chain E: N.34 Chain F: D.66 Chain J: D.132 No protein-ligand interaction detected (PLIP) MG.28: 2 residues within 4Å: Chain G: N.34 Chain H: D.66 No protein-ligand interaction detected (PLIP) MG.32: 2 residues within 4Å: Chain I: D.66 Chain L: D.132 1 PLIP interactions: 1 interactions with chain I Metal complexes: I:D.66 MG.34: 3 residues within 4Å: Chain C: D.132 Chain I: N.34 Chain J: D.66 No protein-ligand interaction detected (PLIP) MG.38: 2 residues within 4Å: Chain D: D.132 Chain K: D.66 No protein-ligand interaction detected (PLIP) MG.42: 1 residues within 4Å: Chain L: D.66 No protein-ligand interaction detected (PLIP) MG.48: 3 residues within 4Å: Chain M: D.66 Chain N: N.34 Chain W: D.132 No protein-ligand interaction detected (PLIP) MG.51: 1 residues within 4Å: Chain E: D.66 No protein-ligand interaction detected (PLIP) MG.52: 2 residues within 4Å: Chain N: D.66 Chain S: Q.139 No protein-ligand interaction detected (PLIP) MG.54: 3 residues within 4Å: Chain M: D.132 Chain O: N.34 Chain P: D.66 No protein-ligand interaction detected (PLIP) MG.57: 3 residues within 4Å: Chain O: D.66 Chain P: N.34 Chain R: D.132 No protein-ligand interaction detected (PLIP) MG.64: 3 residues within 4Å: Chain G: D.66 Chain H: N.34 Chain Q: D.132 1 PLIP interactions: 1 interactions with chain G Metal complexes: G:D.66 MG.68: 3 residues within 4Å: Chain Q: N.34 Chain R: D.66 Chain V: D.132 No protein-ligand interaction detected (PLIP) MG.73: 2 residues within 4Å: Chain S: N.34 Chain T: D.66 No protein-ligand interaction detected (PLIP) MG.77: 2 residues within 4Å: Chain U: D.66 Chain X: D.132 1 PLIP interactions: 1 interactions with chain U Metal complexes: U:D.66 MG.79: 3 residues within 4Å: Chain O: D.132 Chain U: N.34 Chain V: D.66 No protein-ligand interaction detected (PLIP) MG.83: 2 residues within 4Å: Chain P: D.132 Chain W: D.66 No protein-ligand interaction detected (PLIP) MG.87: 1 residues within 4Å: Chain X: D.66 No protein-ligand interaction detected (PLIP)

14 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.8: 20 residues within 4Å: Chain A: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56 Chain B: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, E.56, Y.71 16 PLIP interactions: 8 interactions with chain A, 8 interactions with chain B, Hydrophobic interactions: A:L.19, A:I.22, A:F.26, A:F.49, A:F.49, A:M.52, A:A.55, A:E.56, B:L.19, B:I.22, B:F.26, B:F.26, B:F.49, B:F.49, B:M.52 Salt bridges: B:R.53 HEM.13: 21 residues within 4Å: Chain C: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56, Y.71 Chain D: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, E.56, Y.71 18 PLIP interactions: 8 interactions with chain C, 10 interactions with chain D, Hydrophobic interactions: C:L.19, C:I.22, C:F.26, C:F.49, C:M.52, C:A.55, C:Y.71, D:L.19, D:I.22, D:F.26, D:F.26, D:F.26, D:F.49, D:M.52, D:Y.71 Salt bridges: C:R.53, D:R.53 pi-Stacking: D:F.49 HEM.20: 20 residues within 4Å: Chain E: L.19, I.22, N.23, F.26, R.45, F.49, M.52, A.55, E.56, Y.71 Chain F: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56 17 PLIP interactions: 8 interactions with chain E, 9 interactions with chain F, Hydrophobic interactions: E:L.19, E:I.22, E:F.26, E:F.49, E:F.49, E:M.52, E:A.55, E:Y.71, F:L.19, F:I.22, F:I.22, F:F.26, F:F.49, F:F.49, F:M.52, F:A.55 Salt bridges: F:R.53 HEM.29: 21 residues within 4Å: Chain G: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56 Chain H: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56, Y.71 17 PLIP interactions: 10 interactions with chain H, 7 interactions with chain G, Hydrophobic interactions: H:L.19, H:I.22, H:F.26, H:F.26, H:F.26, H:F.49, H:M.52, H:A.55, H:Y.71, G:L.19, G:I.22, G:F.26, G:F.49, G:M.52, G:A.55 Salt bridges: H:R.53, G:R.53 HEM.33: 21 residues within 4Å: Chain I: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56, Y.71 Chain J: L.19, I.22, N.23, F.26, R.45, F.49, M.52, A.55, E.56, Y.71 18 PLIP interactions: 10 interactions with chain J, 8 interactions with chain I, Hydrophobic interactions: J:L.19, J:I.22, J:I.22, J:F.26, J:F.26, J:F.49, J:M.52, J:A.55, J:Y.71, I:I.22, I:I.22, I:F.26, I:F.49, I:M.52, I:A.55, I:Y.71 Salt bridges: J:R.53, I:R.53 HEM.41: 23 residues within 4Å: Chain K: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56, Y.71 Chain W: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56, Y.71 Ligands: HEM.86 20 PLIP interactions: 10 interactions with chain K, 10 interactions with chain W, Hydrophobic interactions: K:L.19, K:I.22, K:F.26, K:F.26, K:F.49, K:F.49, K:M.52, K:A.55, K:Y.71, W:I.22, W:I.22, W:F.26, W:F.26, W:F.49, W:F.49, W:M.52, W:A.55, W:Y.71 Salt bridges: K:R.53, W:R.53 HEM.45: 23 residues within 4Å: Chain L: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56, Y.71 Chain X: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56, Y.71 Ligands: HEM.90 15 PLIP interactions: 8 interactions with chain L, 7 interactions with chain X, Hydrophobic interactions: L:L.19, L:I.22, L:F.26, L:F.26, L:F.49, L:M.52, L:A.55, X:L.19, X:I.22, X:F.26, X:F.49, X:M.52, X:A.55 Salt bridges: L:R.53, X:R.53 HEM.53: 20 residues within 4Å: Chain M: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56 Chain N: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, E.56, Y.71 16 PLIP interactions: 8 interactions with chain N, 8 interactions with chain M, Hydrophobic interactions: N:L.19, N:I.22, N:F.26, N:F.26, N:F.49, N:F.49, N:M.52, M:L.19, M:I.22, M:F.26, M:F.49, M:F.49, M:M.52, M:A.55, M:E.56 Salt bridges: N:R.53 HEM.58: 21 residues within 4Å: Chain O: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56, Y.71 Chain P: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, E.56, Y.71 18 PLIP interactions: 10 interactions with chain P, 8 interactions with chain O, Hydrophobic interactions: P:L.19, P:I.22, P:F.26, P:F.26, P:F.26, P:F.49, P:M.52, P:Y.71, O:L.19, O:I.22, O:F.26, O:F.49, O:M.52, O:A.55, O:Y.71 Salt bridges: P:R.53, O:R.53 pi-Stacking: P:F.49 HEM.65: 20 residues within 4Å: Chain Q: L.19, I.22, N.23, F.26, R.45, F.49, M.52, A.55, E.56, Y.71 Chain R: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56 17 PLIP interactions: 9 interactions with chain R, 8 interactions with chain Q, Hydrophobic interactions: R:L.19, R:I.22, R:I.22, R:F.26, R:F.49, R:F.49, R:M.52, R:A.55, Q:L.19, Q:I.22, Q:F.26, Q:F.49, Q:F.49, Q:M.52, Q:A.55, Q:Y.71 Salt bridges: R:R.53 HEM.74: 21 residues within 4Å: Chain S: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56 Chain T: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56, Y.71 17 PLIP interactions: 7 interactions with chain S, 10 interactions with chain T, Hydrophobic interactions: S:L.19, S:I.22, S:F.26, S:F.49, S:M.52, S:A.55, T:L.19, T:I.22, T:F.26, T:F.26, T:F.26, T:F.49, T:M.52, T:A.55, T:Y.71 Salt bridges: S:R.53, T:R.53 HEM.78: 21 residues within 4Å: Chain U: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56, Y.71 Chain V: L.19, I.22, N.23, F.26, R.45, F.49, M.52, A.55, E.56, Y.71 18 PLIP interactions: 8 interactions with chain U, 10 interactions with chain V, Hydrophobic interactions: U:I.22, U:I.22, U:F.26, U:F.49, U:M.52, U:A.55, U:Y.71, V:L.19, V:I.22, V:I.22, V:F.26, V:F.26, V:F.49, V:M.52, V:A.55, V:Y.71 Salt bridges: U:R.53, V:R.53 HEM.86: 23 residues within 4Å: Chain K: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56, Y.71 Chain W: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56, Y.71 Ligands: HEM.41 20 PLIP interactions: 10 interactions with chain W, 10 interactions with chain K, Hydrophobic interactions: W:L.19, W:I.22, W:F.26, W:F.26, W:F.49, W:F.49, W:M.52, W:A.55, W:Y.71, K:I.22, K:I.22, K:F.26, K:F.26, K:F.49, K:F.49, K:M.52, K:A.55, K:Y.71 Salt bridges: W:R.53, K:R.53 HEM.90: 23 residues within 4Å: Chain L: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56, Y.71 Chain X: L.19, I.22, N.23, F.26, R.45, F.49, M.52, R.53, A.55, E.56, Y.71 Ligands: HEM.45 15 PLIP interactions: 8 interactions with chain X, 7 interactions with chain L, Hydrophobic interactions: X:L.19, X:I.22, X:F.26, X:F.26, X:F.49, X:M.52, X:A.55, L:L.19, L:I.22, L:F.26, L:F.49, L:M.52, L:A.55 Salt bridges: X:R.53, L:R.53

4 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.16: 6 residues within 4Å: Chain D: E.13, F.75, S.76, R.78, E.96, R.100 6 PLIP interactions: 6 interactions with chain D Hydrogen bonds: D:E.13, D:S.76, D:S.76 Salt bridges: D:E.96, D:E.96, D:R.100 EPE.37: 6 residues within 4Å: Chain J: E.13, F.75, S.76, R.78, E.96, R.100 5 PLIP interactions: 5 interactions with chain J Hydrogen bonds: J:S.76, J:S.76 Salt bridges: J:E.96, J:E.96, J:R.100 EPE.61: 6 residues within 4Å: Chain P: E.13, F.75, S.76, R.78, E.96, R.100 5 PLIP interactions: 5 interactions with chain P Hydrogen bonds: P:S.76, P:S.76 Salt bridges: P:E.96, P:E.96, P:R.100 EPE.82: 6 residues within 4Å: Chain V: E.13, F.75, S.76, R.78, E.96, R.100 5 PLIP interactions: 5 interactions with chain V Hydrogen bonds: V:S.76, V:S.76 Salt bridges: V:E.96, V:E.96, V:R.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Janowski, R. et al., Bacterioferritin from Mycobacterium smegmatis contains zinc in its di-nuclear site. Protein Sci. (2008)

Release Date

2008-01-22

Peptides

Bacterioferritin: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

M
A

N
B

O
C

P
D

Q
E

R
F

S
G

T
H

U
I

V
J

W
K

X
L

Bacterioferritin