SMTL ID : 3bl6.1

Crystal structure of Staphylococcus aureus 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase in complex with formycin A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x FMC: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol(Non-covalent)

FMC.1: 19 residues within 4Å: Chain A: A.9, M.10, I.51, S.77, A.78, G.79, S.151, F.152, I.153, V.172, E.173, M.174, E.175, R.194, S.197, D.198, A.200, F.208 Chain B: F.106 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:I.153, A:M.174, A:E.175, A:E.175, A:R.194, A:S.197, A:D.198, A:D.198 Water bridges: A:S.77 pi-Stacking: A:F.152 FMC.2: 19 residues within 4Å: Chain A: F.106 Chain B: A.9, M.10, I.51, S.77, A.78, G.79, S.151, F.152, I.153, V.172, E.173, M.174, E.175, R.194, S.197, D.198, A.200, F.208 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:I.153, B:M.174, B:E.175, B:E.175, B:R.194, B:S.197, B:D.198, B:D.198 Water bridges: B:S.77 pi-Stacking: B:F.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Siu, K.K. et al., Structure of Staphylococcus aureus 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase. Acta Crystallogr.,Sect.F (2008)

Release Date

2008-06-10

Peptides

5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase