SMTL ID : 3blj.1

Crystal structure of human poly(ADP-ribose) polymerase 15, catalytic fragment

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: D.88, I.89, N.91, H.93 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.89, A:H.93 Water bridges: A:N.91 NA.4: 3 residues within 4Å: Chain B: D.88, I.89, N.91 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.88

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: H.102, G.103, S.142, Y.147 Ligand excluded by PLIP

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 6 residues within 4Å: Chain A: L.76, H.115, D.208 Chain B: K.83, F.207, D.208 6 PLIP interactions: 4 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:H.115, A:D.208, A:D.208, B:D.208, B:D.208 Water bridges: A:S.79 GOL.5: 7 residues within 4Å: Chain A: H.115 Chain B: M.87, P.178, L.189, F.190, D.191, F.207 6 PLIP interactions: 4 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:K.90, A:H.115 Water bridges: B:L.189, B:D.191, B:Q.210, A:H.115

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karlberg, T. et al., Structural Basis for Lack of ADP-ribosyltransferase Activity in Poly(ADP-ribose) Polymerase-13/Zinc Finger Antiviral Protein. J.Biol.Chem. (2015)

Release Date

2007-12-25

Peptides

Poly(ADP-ribose) polymerase 15: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Poly(ADP-ribose) polymerase 15

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