SMTL ID : 3blz.3 (2 other biounits)

Crystal structure of a ntf2-like protein of unknown function (sbal_0622) from shewanella baltica os155 at 1.75 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-tetramer

Ligands

9 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: K.20, I.32, P.35 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.20 Water bridges: A:E.23 EDO.2: 5 residues within 4Å: Chain A: T.5, Q.9, E.10, A.13, K.110 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.110, A:W.115 EDO.3: 7 residues within 4Å: Chain A: T.5, T.6, Y.7, E.10, I.83, V.84, G.85 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.6, A:G.85 Water bridges: A:E.10 EDO.4: 5 residues within 4Å: Chain B: V.67, F.68, H.69, S.98, F.100 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:H.69, B:S.98 EDO.5: 4 residues within 4Å: Chain A: Q.40 Chain B: L.52, T.53, G.54 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:T.53, B:G.54, A:Q.40, A:Q.40 Water bridges: B:T.53 EDO.6: 4 residues within 4Å: Chain C: R.34, S.39, I.57, Q.58 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:R.34, C:R.34, C:S.39 Water bridges: C:Q.58 EDO.7: 7 residues within 4Å: Chain C: T.5, T.6, Y.7, E.10, I.83, V.84, G.85 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:T.6, C:G.85 EDO.8: 5 residues within 4Å: Chain C: K.110, V.111, E.112, G.113 Chain D: N.50 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:K.110, C:K.110, C:E.112, C:G.113 EDO.9: 5 residues within 4Å: Chain C: I.43, G.54, G.55, P.56, G.59 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:P.56, C:G.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of a NTF2-like protein of unknown function (YP_001049020.1) from Shewanella baltica OS155 at 1.75 A resolution. To be published

Release Date

2007-12-25

Peptides

NTF2-like protein of unknown function: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
I

B
J

C
K

D
L

NTF2-like protein of unknown function

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