SMTL ID : 3bnx.3 (2 other biounits)

Crystal structure of Aristolochene synthase complexed with farnesyl diphosphate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.1: 6 residues within 4Å: Chain A: R.162, A.163, R.164, M.166, L.241, C.242 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.162, A:R.164 BME.3: 5 residues within 4Å: Chain B: C.25, V.29, R.62, C.65, L.66 No protein-ligand interaction detected (PLIP)

2 x FPP: FARNESYL DIPHOSPHATE(Non-covalent)

FPP.2: 12 residues within 4Å: Chain A: Y.67, L.86, F.87, D.90, F.153, K.181, L.184, N.219, N.305, W.308, R.314, Y.315 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.67, A:L.86, A:F.87, A:F.87, A:F.153, A:L.184, A:L.184, A:W.308, A:W.308 Hydrogen bonds: A:Y.315 Water bridges: A:K.181 Salt bridges: A:R.314 FPP.4: 10 residues within 4Å: Chain B: Y.67, L.86, F.87, F.153, L.184, N.219, N.305, W.308, R.314, Y.315 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:F.87, B:F.87, B:F.153, B:L.184, B:L.184, B:W.308, B:W.308 Water bridges: B:S.223, B:S.223, B:S.223 Salt bridges: B:R.314, B:R.314

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 7 residues within 4Å: Chain B: A.58, F.60, V.63, F.87, W.308, T.312, R.314 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:W.308, B:T.312, B:L.313, B:R.314, B:R.314

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shishova, E.Y. et al., X-ray Crystallographic Studies of Substrate Binding to Aristolochene Synthase Suggest a Metal Ion Binding Sequence for Catalysis. J.Biol.Chem. (2008)

Release Date

2008-03-25

Peptides

Aristolochene synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Aristolochene synthase

Related Entries With Identical Sequence