- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 14 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 6 residues within 4Å:- Chain A: S.16, Q.17, L.18, R.68
- Chain D: H.127, W.348
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain D- Hydrogen bonds: A:Q.17, A:L.18, A:R.68, D:H.127
- Water bridges: A:R.68
GOL.3: 9 residues within 4Å:- Chain A: L.34, D.104, I.105, T.108, I.132, P.214, I.231, L.232, P.233
No protein-ligand interaction detected (PLIP)GOL.4: 8 residues within 4Å:- Chain A: E.160, S.288, S.289, R.290, D.291, Y.292, Q.433, R.435
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:E.160, A:E.160, A:S.289, A:D.291, A:Y.292, A:R.435
- Water bridges: A:N.157, A:R.290, A:Q.433
GOL.6: 6 residues within 4Å:- Chain B: S.11, M.12, L.15, L.102, R.103, L.106
6 PLIP interactions:6 interactions with chain B- Water bridges: B:S.11, B:S.11, B:S.11, B:S.11, B:R.103, B:R.103
GOL.7: 6 residues within 4Å:- Chain B: S.16, Q.17, L.18, R.68
- Chain C: H.127, W.348
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain C- Hydrogen bonds: B:Q.17, B:L.18, C:H.127
- Water bridges: C:W.348
GOL.8: 3 residues within 4Å:- Chain B: A.25, S.26, S.27
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:S.26, B:S.26, B:S.27, B:S.27
- Water bridges: B:K.24
GOL.9: 8 residues within 4Å:- Chain B: I.216, I.235, R.238, L.239, F.242, G.257, E.260, E.261
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:R.238, B:R.238, B:E.261, B:E.261
- Water bridges: B:E.220
GOL.11: 6 residues within 4Å:- Chain B: H.127, W.348
- Chain C: S.16, Q.17, L.18, R.68
5 PLIP interactions:4 interactions with chain C, 1 interactions with chain B- Hydrogen bonds: C:Q.17, C:L.18, C:R.68, B:H.127
- Water bridges: C:R.68
GOL.12: 9 residues within 4Å:- Chain C: L.34, D.104, I.105, T.108, I.132, P.214, I.231, L.232, P.233
No protein-ligand interaction detected (PLIP)GOL.13: 8 residues within 4Å:- Chain C: E.160, S.288, S.289, R.290, D.291, Y.292, Q.433, R.435
9 PLIP interactions:9 interactions with chain C- Hydrogen bonds: C:E.160, C:E.160, C:S.289, C:D.291, C:Y.292, C:R.435
- Water bridges: C:N.157, C:R.290, C:Q.433
GOL.15: 6 residues within 4Å:- Chain D: S.11, M.12, L.15, L.102, R.103, L.106
6 PLIP interactions:6 interactions with chain D- Water bridges: D:S.11, D:S.11, D:S.11, D:S.11, D:R.103, D:R.103
GOL.16: 6 residues within 4Å:- Chain A: H.127, W.348
- Chain D: S.16, Q.17, L.18, R.68
4 PLIP interactions:2 interactions with chain D, 2 interactions with chain A- Hydrogen bonds: D:Q.17, D:L.18, A:H.127
- Water bridges: A:W.348
GOL.17: 3 residues within 4Å:- Chain D: A.25, S.26, S.27
5 PLIP interactions:5 interactions with chain D- Hydrogen bonds: D:S.26, D:S.26, D:S.27, D:S.27
- Water bridges: D:K.24
GOL.18: 8 residues within 4Å:- Chain D: I.216, I.235, R.238, L.239, F.242, G.257, E.260, E.261
5 PLIP interactions:5 interactions with chain D- Hydrogen bonds: D:R.238, D:R.238, D:E.261, D:E.261
- Water bridges: D:E.220
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Patskovsky, Y. et al., Crystal Structure of Predicted Nucleotide-Binding Protein from Idiomarina baltica. To be Published
- Release Date
- 2008-01-01
- Peptides
- Predicted Rossmann fold nucleotide-binding domain-containing protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 14 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Patskovsky, Y. et al., Crystal Structure of Predicted Nucleotide-Binding Protein from Idiomarina baltica. To be Published
- Release Date
- 2008-01-01
- Peptides
- Predicted Rossmann fold nucleotide-binding domain-containing protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B