SMTL ID : 3bqk.1

Structure of a chondroitin sulphate binding DBL3X from a var2csa encoded PfEMP1 protein in complex with sulphate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: G.101, K.107, K.110, K.111, G.112, R.250 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.112 Water bridges: A:R.250, A:R.250 Salt bridges: A:K.107, A:R.250

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: H.128, Q.131, R.132, I.135, P.225, T.226, S.235, K.238 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.235, A:K.238 Water bridges: A:H.128, A:R.132, A:R.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Higgins, M.K., The structure of a chondroitin sulfate-binding domain important in placental malaria. J.Biol.Chem. (2008)

Release Date

2008-06-24

Peptides

Erythrocyte membrane protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Erythrocyte membrane protein 1

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