SMTL ID : 3bts.1

Crystal structure of a ternary complex of the transcriptional repressor Gal80p (Gal80S0 [G301R]) and the acidic activation domain of Gal4p (aa 854-874) from Saccharomyces cerevisiae with NAD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-2-2-mer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 21 residues within 4Å: Chain A: V.26, G.27, N.29, K.32, G.33, W.34, P.58, A.96, I.97, Q.98, V.99, S.101, H.102, E.125, W.126, S.152, Q.154, H.216 Chain C: T.7, M.8, D.10 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:N.29, A:W.34, A:Q.98, A:Q.98, A:S.101, A:S.101, A:H.102, A:E.125, A:A.127, A:Q.154 Water bridges: A:A.35 pi-Stacking: A:W.34, A:W.34 NAD.2: 21 residues within 4Å: Chain B: V.26, G.27, N.29, K.32, G.33, W.34, P.58, A.96, I.97, Q.98, V.99, S.101, H.102, V.105, E.125, W.126, S.152, Q.154, H.216 Chain D: T.7, D.10 12 PLIP interactions: 12 interactions with chain B Hydrogen bonds: B:N.29, B:W.34, B:I.97, B:Q.98, B:S.101, B:S.101, B:A.127, B:Q.154, B:H.216 Water bridges: B:G.27 pi-Stacking: B:W.34, B:W.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumar, P.R. et al., NADP regulates the yeast GAL induction system. Science (2008)

Release Date

2008-03-04

Peptides

Galactose/lactose metabolism regulatory protein GAL80: AB
Regulatory protein GAL4: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
E

D
F

Galactose/lactose metabolism regulatory protein GAL80

Regulatory protein GAL4

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