SMTL ID : 3bv4.1

Crystal structure of a rabbit muscle fructose-1,6-bisphosphate aldolase A dimer variant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

12 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: K.38, R.39, R.300 5 PLIP interactions: 5 interactions with chain A Water bridges: A:R.39, A:R.39 Salt bridges: A:K.38, A:R.39, A:R.300 SO4.2: 2 residues within 4Å: Chain A: T.48, E.49 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.49 Water bridges: A:N.47, A:T.48, A:E.50, A:R.52 SO4.3: 5 residues within 4Å: Chain A: K.9 Chain B: K.196, Q.199, T.251, R.255 7 PLIP interactions: 1 interactions with chain A, 6 interactions with chain B Salt bridges: A:K.9, B:K.196, B:R.255 Hydrogen bonds: B:Q.199, B:Q.199 Water bridges: B:K.196, B:R.255 SO4.4: 3 residues within 4Å: Chain A: F.76, H.77, K.107 2 PLIP interactions: 2 interactions with chain A Water bridges: A:D.106 Salt bridges: A:H.77 SO4.5: 1 residues within 4Å: Chain A: S.272 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.272 Water bridges: A:E.275 SO4.6: 2 residues within 4Å: Chain A: D.63, D.64 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.64 Water bridges: A:D.63, A:D.64 SO4.8: 3 residues within 4Å: Chain B: K.38, R.39, R.300 5 PLIP interactions: 5 interactions with chain B Water bridges: B:R.39, B:R.39 Salt bridges: B:K.38, B:R.39, B:R.300 SO4.9: 2 residues within 4Å: Chain B: T.48, E.49 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:E.49 Water bridges: B:N.47, B:T.48, B:E.50, B:R.52 SO4.10: 5 residues within 4Å: Chain A: K.196, Q.199, T.251, R.255 Chain B: K.9 7 PLIP interactions: 6 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Q.199, A:Q.199 Water bridges: A:K.196, A:R.255 Salt bridges: A:K.196, A:R.255, B:K.9 SO4.11: 3 residues within 4Å: Chain B: F.76, H.77, K.107 2 PLIP interactions: 2 interactions with chain B Water bridges: B:D.106 Salt bridges: B:H.77 SO4.12: 1 residues within 4Å: Chain B: S.272 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.272 Water bridges: B:E.275 SO4.13: 2 residues within 4Å: Chain B: D.63, D.64 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:D.64 Water bridges: B:D.63, B:D.64

2 x 13P: 1,3-DIHYDROXYACETONEPHOSPHATE(Non-covalent)

13P.7: 8 residues within 4Å: Chain A: K.226, L.267, S.268, G.269, S.297, Y.298, G.299, R.300 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:S.268, A:G.269, A:S.297, A:G.299, A:R.300 Water bridges: A:R.145, A:K.226, A:K.226, A:K.226 Salt bridges: A:K.226 13P.14: 8 residues within 4Å: Chain B: K.226, L.267, S.268, G.269, S.297, Y.298, G.299, R.300 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:S.268, B:G.269, B:S.297, B:G.299, B:R.300 Water bridges: B:R.145, B:K.226, B:K.226, B:K.226 Salt bridges: B:K.226

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sherawat, M. et al., Structure of a rabbit muscle fructose-1,6-bisphosphate aldolase A dimer variant. Acta Crystallogr.,Sect.D (2008)

Release Date

2008-06-24

Peptides

Fructose-bisphosphate aldolase A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Fructose-bisphosphate aldolase A