SMTL ID : 3bx9.1 (2 other biounits)

Monomeric Far-red Fluorescent Protein mKate Crystallized at pH 2.0

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

3 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 5 residues within 4Å: Chain A: N.32, N.33, N.135, F.136, S.138 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.32, A:N.33, A:N.135 Water bridges: A:N.33, A:N.135, A:S.138 CIT.2: 3 residues within 4Å: Chain A: N.81, T.83, V.228 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:T.83 Hydrogen bonds: A:N.81, A:N.81 CIT.3: 7 residues within 4Å: Chain A: E.43, G.44, K.45, T.50, Q.51, T.52, H.224 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.45, A:T.52, A:T.52 Salt bridges: A:K.45, A:H.224

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 4 residues within 4Å: Chain A: D.108, P.137, G.140, P.141 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pletnev, S. et al., A Crystallographic Study of Bright Far-Red Fluorescent Protein mKate Reveals pH-induced cis-trans Isomerization of the Chromophore. J.Biol.Chem. (2008)

Release Date

2008-07-22

Peptides

Far-red fluorescent protein mKate: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Far-red fluorescent protein mKate

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