SMTL ID : 3bxd.1

Crystal structure of Mouse Myo-inositol oxygenase (re-refined)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x FE: FE (III) ION(Non-covalent)

FE.1: 8 residues within 4Å: Chain A: H.102, H.127, D.128, K.131, D.257 Ligands: FE.2, OH.3, INS.4 6 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions, 1 Ligand-Ligand interactions Metal complexes: A:H.102, A:H.127, A:D.128, A:D.257, H2O.1, OH.3 FE.2: 9 residues within 4Å: Chain A: H.127, D.128, K.131, H.198, H.224, S.225 Ligands: FE.1, OH.3, INS.4 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:D.128, A:H.198, A:H.224, OH.3

1 x OH: HYDROXIDE ION(Non-covalent)

OH.3: 7 residues within 4Å: Chain A: H.127, D.128, H.224, D.257 Ligands: FE.1, FE.2, INS.4 No protein-ligand interaction detected (PLIP)

1 x INS: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE(Non-covalent)

INS.4: 19 residues within 4Å: Chain A: R.33, Y.48, D.89, S.91, D.92, P.93, D.128, K.131, V.144, G.145, D.146, H.198, H.224, S.225, Y.227, K.261 Ligands: FE.1, FE.2, OH.3 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.33, A:Y.48, A:Y.48, A:D.89, A:D.92, A:K.131, A:G.145, A:D.146

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.5: 12 residues within 4Å: Chain A: Q.55, T.56, V.57, F.148, V.150, G.151, C.152, P.154, N.168, D.170, L.171, Y.176 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.151

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thorsell, A.G. et al., Structural and biophysical characterization of human myo-inositol oxygenase. J.Biol.Chem. (2008)

Release Date

2008-02-05

Peptides

INOSITOL OXYGENASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

INOSITOL OXYGENASE

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