SMTL ID : 3byd.1

Crystal structure of beta-lactamase OXY-1-1 from Klebsiella oxytoca

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.93 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: S.49, S.109, T.195, K.213, T.214, G.215, A.216 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:S.49, A:S.109, A:T.195, A:T.214, A:A.216 Water bridges: A:S.49, A:S.49, A:K.52, A:S.109 Salt bridges: A:K.213 SO4.2: 6 residues within 4Å: Chain A: S.207, W.208, P.230, E.231, N.232, H.233 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.207, A:S.207, A:E.231, A:N.232, A:N.232 Salt bridges: A:H.233 SO4.3: 1 residues within 4Å: Chain A: G.197 No protein-ligand interaction detected (PLIP) SO4.4: 2 residues within 4Å: Chain A: R.44, K.156 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.44, A:K.156

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.5: 2 residues within 4Å: Chain A: I.152, R.157 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.143, A:R.157, A:R.157 Salt bridges: A:R.157

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liang, Y.-H. et al., Structural insights into the broadened substrate profile of the extended-spectrum beta-lactamase OXY-1-1 from Klebsiella oxytoca. Acta Crystallogr.,Sect.D (2012)

Release Date

2009-01-20

Peptides

Beta-lactamase OXY-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-lactamase OXY-1