SMTL ID : 3c0x.1

I-SceI in complex with a top nicked DNA substrate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

3 x CA: CALCIUM ION(Non-functional Binders)(Non-covalent)

CA.1: 3 residues within 4Å: Chain B: C.1 Chain C: A.15, T.16 No protein-ligand interaction detected (PLIP) CA.2: 4 residues within 4Å: Chain A: A.14 Chain C: C.17 Chain D: D.44, D.144 4 PLIP interactions: 2 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:D.44, D:D.144, H2O.1, H2O.2 CA.3: 6 residues within 4Å: Chain A: A.14 Chain B: C.1 Chain C: C.17 Chain D: G.43, D.44, D.145 3 PLIP interactions: 2 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:D.44, D:D.145, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moure, C.M. et al., Crystal structures of I-SceI complexed to nicked DNA substrates: snapshots of intermediates along the DNA cleavage reaction pathway. Nucleic Acids Res. (2008)

Release Date

2008-05-06

Peptides

Intron-encoded endonuclease I-SceI: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

D
A

Intron-encoded endonuclease I-SceI

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