SMTL ID : 3c4t.1

Structure of RNaseIIIb and dsRNA binding domains of mouse Dicer

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

6 x CD: CADMIUM ION(Non-covalent)

CD.1: 2 residues within 4Å: Chain A: H.68, E.192 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.68 CD.2: 1 residues within 4Å: Chain A: H.10 No protein-ligand interaction detected (PLIP) CD.3: 3 residues within 4Å: Chain A: E.54, D.159, E.162 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.54, A:D.159, A:E.162 CD.4: 2 residues within 4Å: Chain B: H.68, E.192 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:H.68 CD.5: 1 residues within 4Å: Chain B: H.10 No protein-ligand interaction detected (PLIP) CD.6: 3 residues within 4Å: Chain B: E.54, D.159, E.162 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:E.54, B:D.159, B:E.162

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Du, Z. et al., Structural and biochemical insights into the dicing mechanism of mouse Dicer: A conserved lysine is critical for dsRNA cleavage. Proc.Natl.Acad.Sci.Usa (2008)

Release Date

2008-02-19

Peptides

Endoribonuclease Dicer: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Endoribonuclease Dicer

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