SMTL ID : 3c6n.1

Small molecule agonists and antagonists of F-box protein-substrate interactions in auxin perception and signaling

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

1 x IHP: INOSITOL HEXAKISPHOSPHATE(Non-covalent)

IHP.1: 14 residues within 4Å: Chain B: F.49, K.74, H.78, K.113, R.114, R.344, R.401, R.403, R.435, R.436, M.460, R.484, K.485, R.509 29 PLIP interactions: 29 interactions with chain B Hydrogen bonds: B:R.344, B:R.403, B:R.403, B:R.435, B:R.436, B:R.509 Water bridges: B:K.113, B:R.344, B:R.344, B:R.344, B:R.344, B:R.401, B:R.401 Salt bridges: B:K.74, B:K.74, B:K.74, B:H.78, B:K.113, B:K.113, B:R.114, B:R.114, B:R.344, B:R.401, B:R.403, B:R.436, B:R.484, B:K.485, B:K.485, B:R.509

1 x 2S8: (2S)-8-[(tert-butoxycarbonyl)amino]-2-(1H-indol-3-yl)octanoic acid(Non-covalent)

2S8.2: 14 residues within 4Å: Chain B: H.78, D.81, F.82, L.378, F.380, R.403, L.404, C.405, R.436, S.438, L.439, S.462, V.463, A.464 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:F.82, B:F.82, B:F.82, B:L.378, B:F.380, B:A.464 Hydrogen bonds: B:D.81, B:L.404, B:S.438, B:S.462, B:S.462 Water bridges: B:R.436 Salt bridges: B:H.78, B:R.403, B:R.436

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hayashi, K. et al., Small-molecule agonists and antagonists of F-box protein-substrate interactions in auxin perception and signaling. Proc.Natl.Acad.Sci.Usa (2008)

Release Date

2008-04-22

Peptides

SKP1-like protein 1A: A
TRANSPORT INHIBITOR RESPONSE 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

SKP1-like protein 1A

TRANSPORT INHIBITOR RESPONSE 1

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