SMTL ID : 3c7n.1

Structure of the Hsp110:Hsc70 Nucleotide Exchange Complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.12 Å

Oligo State

hetero-1-1-mer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 7 residues within 4Å: Chain A: N.13, K.71, H.208, S.209, S.210 Ligands: BEF.5, ADP.6 No protein-ligand interaction detected (PLIP) MG.10: 3 residues within 4Å: Chain B: T.13, K.71, T.204 No protein-ligand interaction detected (PLIP)

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: N.14, N.15, K.278, R.348 Ligands: ADP.6 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.15, A:R.348 Salt bridges: A:K.278 SO4.3: 7 residues within 4Å: Chain A: I.26, D.27, I.28, R.36, K.376 Chain B: K.25, R.36 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:I.28 Salt bridges: A:R.36, A:K.376, B:K.25, B:R.36 SO4.4: 9 residues within 4Å: Chain A: S.183, F.187, T.367, L.368, N.369, A.373, K.376 Chain B: E.27, Y.134 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:N.369, B:E.27, B:Y.134 Salt bridges: A:K.376 SO4.11: 5 residues within 4Å: Chain A: V.33, N.35, K.56 Chain B: R.269, R.272 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Salt bridges: B:R.269, B:R.272, A:K.56 Hydrogen bonds: A:N.35

1 x BEF: BERYLLIUM TRIFLUORIDE ION(Non-covalent)

BEF.5: 7 residues within 4Å: Chain A: D.10, G.12, D.176, D.205, I.374 Ligands: MG.1, ADP.6 No protein-ligand interaction detected (PLIP)

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.6: 20 residues within 4Å: Chain A: G.12, N.13, N.14, N.15, G.207, H.208, G.236, E.274, K.277, K.278, S.281, G.344, G.345, T.346, R.348, I.349 Chain B: Q.33 Ligands: MG.1, SO4.2, BEF.5 16 PLIP interactions: 2 interactions with chain B, 14 interactions with chain A Hydrogen bonds: B:Q.33, B:Q.33, A:G.12, A:N.13, A:N.14, A:N.15, A:N.15, A:H.208, A:E.274, A:E.274, A:K.277, A:K.278, A:S.281, A:G.345, A:R.348 Salt bridges: A:K.71 ADP.12: 16 residues within 4Å: Chain A: S.34 Chain B: L.200, G.201, G.202, G.230, E.231, E.268, K.271, R.272, S.275, G.338, G.339, S.340, R.342, I.343, D.366 13 PLIP interactions: 2 interactions with chain A, 11 interactions with chain B Hydrogen bonds: A:S.34, A:S.34, B:T.14, B:T.14, B:G.202, B:E.231, B:E.268, B:E.268, B:K.271, B:S.275, B:G.339, B:R.342, B:D.366

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.7: 3 residues within 4Å: Chain B: A.191, E.192, R.193 Ligand excluded by PLIP CL.8: 1 residues within 4Å: Chain B: R.236 Ligand excluded by PLIP CL.9: 2 residues within 4Å: Chain A: V.30 Chain B: R.342 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schuermann, J.P. et al., Structure of the Hsp110:Hsc70 nucleotide exchange machine. Mol.Cell (2008)

Release Date

2008-05-27

Peptides

Heat shock protein homolog SSE1: A
Heat shock cognate: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Heat shock protein homolog SSE1

Heat shock cognate