SMTL ID : 3c9x.1

Crystal structure of Trichoderma reesei aspartic proteinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: G.80, G.221, T.222 Ligands: GOL.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.221 Water bridges: A:T.223 GOL.2: 3 residues within 4Å: Chain A: Q.248, T.281, F.291 No protein-ligand interaction detected (PLIP) GOL.3: 7 residues within 4Å: Chain A: E.16, D.81, S.83, E.115, F.116, D.119, I.122 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.16, A:D.81, A:S.83, A:E.115, A:D.119 GOL.4: 9 residues within 4Å: Chain A: G.37, G.80, F.194, I.217, D.219, T.222, I.302, I.304 Ligands: GOL.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.80, A:D.219, A:T.222 GOL.5: 9 residues within 4Å: Chain A: G.37, S.38, S.39, A.129, F.130, G.133, Q.192, G.193, F.194 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.37, A:S.39, A:Q.192 Water bridges: A:Q.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nascimento, A.S. et al., Statistical coupling analysis of aspartic proteinases based on crystal structures of the Trichoderma reesei enzyme and its complex with pepstatin A. J.Mol.Biol. (2008)

Release Date

2008-08-19

Peptides

Trichoderma reesei Aspartic protease: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Trichoderma reesei Aspartic protease

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