SMTL ID : 3cb2.1

Crystal structure of human gamma-tubulin bound to GDP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 18 residues within 4Å: Chain A: G.11, Q.12, C.13, Q.16, I.17, N.102, S.140, A.142, G.143, G.144, T.145, G.146, V.171, P.173, N.207, F.225, I.228, N.229 23 PLIP interactions: 23 interactions with chain A Hydrogen bonds: A:Q.12, A:Q.12, A:C.13, A:Q.16, A:S.140, A:G.144, A:T.145, A:T.145, A:T.145, A:G.146, A:N.207, A:N.207, A:N.229, A:N.229 Water bridges: A:Q.12, A:G.14, A:D.68, A:D.68, A:A.142, A:G.143, A:S.147 pi-Stacking: A:F.225, A:F.225 GDP.2: 16 residues within 4Å: Chain B: G.11, Q.12, C.13, Q.16, S.140, G.143, G.144, T.145, G.146, V.171, P.173, E.177, N.207, F.225, I.228, N.229 21 PLIP interactions: 21 interactions with chain B Hydrogen bonds: B:Q.12, B:C.13, B:S.140, B:G.144, B:T.145, B:T.145, B:T.145, B:G.146, B:E.177, B:E.177, B:N.207, B:N.207, B:N.229, B:N.229 Water bridges: B:Q.12, B:G.14, B:A.142, B:G.143, B:S.147 pi-Stacking: B:F.225, B:F.225

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rice, L.M. et al., The lattice as allosteric effector: structural studies of alphabeta- and gamma-tubulin clarify the role of GTP in microtubule assembly. Proc.Natl.Acad.Sci.Usa (2008)

Release Date

2008-06-10

Peptides

tubulin gamma-1 chain: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

tubulin gamma-1 chain