SMTL ID : 3cbp.1

Set7/9-ER-Sinefungin complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.42 Å

Oligo State

hetero-1-1-mer

Ligands

1 x SFG: SINEFUNGIN(Non-covalent)

SFG.1: 15 residues within 4Å: Chain A: I.113, A.116, G.117, E.118, G.154, N.155, H.183, K.184, A.185, N.186, H.187, Y.225, W.242, E.246 Chain B: K.5 19 PLIP interactions: 18 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:Y.225 Hydrogen bonds: A:E.118, A:H.183, A:N.186, A:N.186, A:H.187, A:E.246, B:K.5 Water bridges: A:E.118, A:E.118, A:N.153, A:G.154, A:N.155, A:N.155, A:N.155, A:N.172 Salt bridges: A:K.184 pi-Stacking: A:W.242, A:W.242

3 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.2: 2 residues within 4Å: Chain A: V.174, C.178 No protein-ligand interaction detected (PLIP) BME.3: 8 residues within 4Å: Chain A: D.84, K.85, S.86, T.87, C.90, I.91, S.92, T.93 No protein-ligand interaction detected (PLIP) BME.4: 2 residues within 4Å: Chain A: C.9, V.23 No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 6 residues within 4Å: Chain A: T.190, P.191, N.192, R.213, E.219, T.222 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.190, A:R.213 Water bridges: A:S.188, A:T.222

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Subramanian, K. et al., Regulation of estrogen receptor alpha by the SET7 lysine methyltransferase. Mol.Cell (2008)

Release Date

2008-05-13

Peptides

Histone-lysine N-methyltransferase SETD7: A
Estrogen receptor: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Histone-lysine N-methyltransferase SETD7

Estrogen receptor

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