SMTL ID : 3cbq.1

Crystal structure of the human REM2 GTPase with bound GDP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.82 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: S.37 Ligands: GDP.2 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:S.37, H2O.1, H2O.1, H2O.1, H2O.2

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 16 residues within 4Å: Chain A: E.31, S.32, G.33, V.34, G.35, K.36, S.37, T.38, N.138, K.139, D.141, L.142, S.168, A.169, A.170 Ligands: MG.1 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:E.31, A:G.33, A:V.34, A:G.35, A:K.36, A:S.37, A:T.38, A:T.38, A:N.138, A:K.139, A:K.139, A:A.169, A:A.170 Water bridges: A:T.38 Salt bridges: A:K.36, A:D.141 pi-Cation interactions: A:K.139

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 10 residues within 4Å: Chain A: G.30, E.31, V.34, I.102, V.103, F.104, S.111, K.114, V.115, T.118 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.31, A:E.31, A:V.103, A:T.118 EDO.4: 5 residues within 4Å: Chain A: W.80, R.90, D.91, L.94, R.121 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.91, A:R.121, A:R.121

1 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.5: 4 residues within 4Å: Chain A: S.140, D.141, S.168, L.171 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nedyalkova, L. et al., Crystal structure of the human REM2 GTPase with bound GDP. To be Published

Release Date

2008-03-04

Peptides

GTP-binding protein REM 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GTP-binding protein REM 2